Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NCKAP1Q9Y2A7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
NCKAP1Q9Y2A7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NCKAP1Q9Y2A7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.23■■□□□ 1.15
NCKAP1Q9Y2A7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NCKAP1Q9Y2A7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NCKAP1Q9Y2A7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.23■■□□□ 1.15
NCKAP1Q9Y2A7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
NCKAP1Q9Y2A7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NCKAP1Q9Y2A7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NCKAP1Q9Y2A7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.22■■□□□ 1.15
NCKAP1Q9Y2A7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
NCKAP1Q9Y2A7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
NCKAP1Q9Y2A7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NCKAP1Q9Y2A7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NCKAP1Q9Y2A7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NCKAP1Q9Y2A7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NCKAP1Q9Y2A7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.22■■□□□ 1.15
NCKAP1Q9Y2A7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NCKAP1Q9Y2A7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.22■■□□□ 1.15
NCKAP1Q9Y2A7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.22■■□□□ 1.15
NCKAP1Q9Y2A7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
NCKAP1Q9Y2A7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NCKAP1Q9Y2A7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NCKAP1Q9Y2A7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
NCKAP1Q9Y2A7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NCKAP1Q9Y2A7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NCKAP1Q9Y2A7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NCKAP1Q9Y2A7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NCKAP1Q9Y2A7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NCKAP1Q9Y2A7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.21■■□□□ 1.15
NCKAP1Q9Y2A7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NCKAP1Q9Y2A7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.21■■□□□ 1.15
NCKAP1Q9Y2A7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NCKAP1Q9Y2A7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NCKAP1Q9Y2A7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NCKAP1Q9Y2A7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NCKAP1Q9Y2A7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NCKAP1Q9Y2A7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.2■■□□□ 1.15
NCKAP1Q9Y2A7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NCKAP1Q9Y2A7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.2■■□□□ 1.14
NCKAP1Q9Y2A7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.2■■□□□ 1.14
NCKAP1Q9Y2A7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
NCKAP1Q9Y2A7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NCKAP1Q9Y2A7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.2■■□□□ 1.14
NCKAP1Q9Y2A7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NCKAP1Q9Y2A7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NCKAP1Q9Y2A7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NCKAP1Q9Y2A7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NCKAP1Q9Y2A7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NCKAP1Q9Y2A7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.19■■□□□ 1.14
NCKAP1Q9Y2A7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.19■■□□□ 1.14
NCKAP1Q9Y2A7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.19■■□□□ 1.14
NCKAP1Q9Y2A7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.19■■□□□ 1.14
NCKAP1Q9Y2A7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.19■■□□□ 1.14
NCKAP1Q9Y2A7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NCKAP1Q9Y2A7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.19■■□□□ 1.14
NCKAP1Q9Y2A7 AC079630.1-202ENST00000618127 1840 ntBASIC22.19■■□□□ 1.14
NCKAP1Q9Y2A7 AL139125.2-201ENST00000623134 1869 ntBASIC22.19■■□□□ 1.14
NCKAP1Q9Y2A7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.19■■□□□ 1.14
NCKAP1Q9Y2A7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NCKAP1Q9Y2A7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.19■■□□□ 1.14
NCKAP1Q9Y2A7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.18■■□□□ 1.14
NCKAP1Q9Y2A7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.18■■□□□ 1.14
NCKAP1Q9Y2A7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NCKAP1Q9Y2A7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.18■■□□□ 1.14
NCKAP1Q9Y2A7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.18■■□□□ 1.14
NCKAP1Q9Y2A7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NCKAP1Q9Y2A7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.18■■□□□ 1.14
NCKAP1Q9Y2A7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.18■■□□□ 1.14
NCKAP1Q9Y2A7 AL031602.1-201ENST00000633169 911 ntBASIC22.18■■□□□ 1.14
NCKAP1Q9Y2A7 AC105233.4-201ENST00000642045 216 ntBASIC22.18■■□□□ 1.14
NCKAP1Q9Y2A7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NCKAP1Q9Y2A7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
NCKAP1Q9Y2A7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NCKAP1Q9Y2A7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
NCKAP1Q9Y2A7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
NCKAP1Q9Y2A7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NCKAP1Q9Y2A7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NCKAP1Q9Y2A7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
NCKAP1Q9Y2A7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.17■■□□□ 1.14
NCKAP1Q9Y2A7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
NCKAP1Q9Y2A7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NCKAP1Q9Y2A7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.17■■□□□ 1.14
NCKAP1Q9Y2A7 AC004812.2-201ENST00000611079 2094 ntBASIC22.17■■□□□ 1.14
NCKAP1Q9Y2A7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
NCKAP1Q9Y2A7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.17■■□□□ 1.14
NCKAP1Q9Y2A7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NCKAP1Q9Y2A7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
NCKAP1Q9Y2A7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NCKAP1Q9Y2A7 LINC02228-203ENST00000641970 1355 ntBASIC22.16■■□□□ 1.14
NCKAP1Q9Y2A7 KRT18P5-201ENST00000436075 1291 ntBASIC22.16■■□□□ 1.14
NCKAP1Q9Y2A7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.16■■□□□ 1.14
NCKAP1Q9Y2A7 AC068587.7-201ENST00000641602 218 ntBASIC22.16■■□□□ 1.14
NCKAP1Q9Y2A7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NCKAP1Q9Y2A7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NCKAP1Q9Y2A7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NCKAP1Q9Y2A7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
NCKAP1Q9Y2A7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NCKAP1Q9Y2A7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 296.7 ms