Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.84■■□□□ 1.41
UBQLN1Q9UMX0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBQLN1Q9UMX0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
UBQLN1Q9UMX0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
UBQLN1Q9UMX0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.83■■□□□ 1.41
UBQLN1Q9UMX0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.83■■□□□ 1.41
UBQLN1Q9UMX0 IRS3P-201ENST00000223076 1006 ntBASIC23.83■■□□□ 1.41
UBQLN1Q9UMX0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
UBQLN1Q9UMX0 IGHV3-19-201ENST00000521488 291 ntBASIC23.83■■□□□ 1.41
UBQLN1Q9UMX0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.83■■□□□ 1.41
UBQLN1Q9UMX0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
UBQLN1Q9UMX0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
UBQLN1Q9UMX0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBQLN1Q9UMX0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
UBQLN1Q9UMX0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.82■■□□□ 1.4
UBQLN1Q9UMX0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBQLN1Q9UMX0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.82■■□□□ 1.4
UBQLN1Q9UMX0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.82■■□□□ 1.4
UBQLN1Q9UMX0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.82■■□□□ 1.4
UBQLN1Q9UMX0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
UBQLN1Q9UMX0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBQLN1Q9UMX0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
UBQLN1Q9UMX0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
UBQLN1Q9UMX0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBQLN1Q9UMX0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBQLN1Q9UMX0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.82■■□□□ 1.4
UBQLN1Q9UMX0 TSPY26P-201ENST00000476365 1326 ntBASIC23.82■■□□□ 1.4
UBQLN1Q9UMX0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.81■■□□□ 1.4
UBQLN1Q9UMX0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
UBQLN1Q9UMX0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UBQLN1Q9UMX0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBQLN1Q9UMX0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
UBQLN1Q9UMX0 AP005435.1-201ENST00000529293 1178 ntBASIC23.81■■□□□ 1.4
UBQLN1Q9UMX0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBQLN1Q9UMX0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.81■■□□□ 1.4
UBQLN1Q9UMX0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UBQLN1Q9UMX0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UBQLN1Q9UMX0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
UBQLN1Q9UMX0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBQLN1Q9UMX0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBQLN1Q9UMX0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBQLN1Q9UMX0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBQLN1Q9UMX0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBQLN1Q9UMX0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.8■■□□□ 1.4
UBQLN1Q9UMX0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBQLN1Q9UMX0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBQLN1Q9UMX0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.79■■□□□ 1.4
UBQLN1Q9UMX0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.79■■□□□ 1.4
UBQLN1Q9UMX0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBQLN1Q9UMX0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.79■■□□□ 1.4
UBQLN1Q9UMX0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
UBQLN1Q9UMX0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.79■■□□□ 1.4
UBQLN1Q9UMX0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
UBQLN1Q9UMX0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
UBQLN1Q9UMX0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
UBQLN1Q9UMX0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.79■■□□□ 1.4
UBQLN1Q9UMX0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBQLN1Q9UMX0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
UBQLN1Q9UMX0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
UBQLN1Q9UMX0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UBQLN1Q9UMX0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
UBQLN1Q9UMX0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.78■■□□□ 1.4
UBQLN1Q9UMX0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.78■■□□□ 1.4
UBQLN1Q9UMX0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
UBQLN1Q9UMX0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UBQLN1Q9UMX0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UBQLN1Q9UMX0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
UBQLN1Q9UMX0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
UBQLN1Q9UMX0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
UBQLN1Q9UMX0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UBQLN1Q9UMX0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
UBQLN1Q9UMX0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
UBQLN1Q9UMX0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
UBQLN1Q9UMX0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBQLN1Q9UMX0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBQLN1Q9UMX0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
UBQLN1Q9UMX0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBQLN1Q9UMX0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBQLN1Q9UMX0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBQLN1Q9UMX0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
UBQLN1Q9UMX0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
UBQLN1Q9UMX0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.77■■□□□ 1.4
UBQLN1Q9UMX0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.77■■□□□ 1.4
UBQLN1Q9UMX0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBQLN1Q9UMX0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
UBQLN1Q9UMX0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.76■■□□□ 1.39
UBQLN1Q9UMX0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.76■■□□□ 1.39
UBQLN1Q9UMX0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBQLN1Q9UMX0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBQLN1Q9UMX0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.75■■□□□ 1.39
UBQLN1Q9UMX0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBQLN1Q9UMX0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBQLN1Q9UMX0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UBQLN1Q9UMX0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
UBQLN1Q9UMX0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.75■■□□□ 1.39
UBQLN1Q9UMX0 AC068587.7-201ENST00000641602 218 ntBASIC23.75■■□□□ 1.39
UBQLN1Q9UMX0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UBQLN1Q9UMX0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBQLN1Q9UMX0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBQLN1Q9UMX0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms