Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
THUMPD1Q9NXG2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THUMPD1Q9NXG2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.8■□□□□ 0.92
THUMPD1Q9NXG2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THUMPD1Q9NXG2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
THUMPD1Q9NXG2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.79■□□□□ 0.92
THUMPD1Q9NXG2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
THUMPD1Q9NXG2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.79■□□□□ 0.92
THUMPD1Q9NXG2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
THUMPD1Q9NXG2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
THUMPD1Q9NXG2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
THUMPD1Q9NXG2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
THUMPD1Q9NXG2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
THUMPD1Q9NXG2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
THUMPD1Q9NXG2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
THUMPD1Q9NXG2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.78■□□□□ 0.92
THUMPD1Q9NXG2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
THUMPD1Q9NXG2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
THUMPD1Q9NXG2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
THUMPD1Q9NXG2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
THUMPD1Q9NXG2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
THUMPD1Q9NXG2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
THUMPD1Q9NXG2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.78■□□□□ 0.92
THUMPD1Q9NXG2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
THUMPD1Q9NXG2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.78■□□□□ 0.92
THUMPD1Q9NXG2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
THUMPD1Q9NXG2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.78■□□□□ 0.92
THUMPD1Q9NXG2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
THUMPD1Q9NXG2 LINC01529-204ENST00000636474 1715 ntBASIC20.78■□□□□ 0.92
THUMPD1Q9NXG2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
THUMPD1Q9NXG2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
THUMPD1Q9NXG2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
THUMPD1Q9NXG2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
THUMPD1Q9NXG2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
THUMPD1Q9NXG2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
THUMPD1Q9NXG2 Z92544.1-202ENST00000571933 1220 ntBASIC20.77■□□□□ 0.92
THUMPD1Q9NXG2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
THUMPD1Q9NXG2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
THUMPD1Q9NXG2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
THUMPD1Q9NXG2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.77■□□□□ 0.91
THUMPD1Q9NXG2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THUMPD1Q9NXG2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THUMPD1Q9NXG2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.76■□□□□ 0.91
THUMPD1Q9NXG2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.76■□□□□ 0.91
THUMPD1Q9NXG2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
THUMPD1Q9NXG2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THUMPD1Q9NXG2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THUMPD1Q9NXG2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THUMPD1Q9NXG2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.75■□□□□ 0.91
THUMPD1Q9NXG2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
THUMPD1Q9NXG2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
THUMPD1Q9NXG2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
THUMPD1Q9NXG2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
THUMPD1Q9NXG2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
THUMPD1Q9NXG2 KRT125P-201ENST00000546827 989 ntBASIC20.75■□□□□ 0.91
THUMPD1Q9NXG2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
THUMPD1Q9NXG2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.75■□□□□ 0.91
THUMPD1Q9NXG2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.75■□□□□ 0.91
THUMPD1Q9NXG2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
THUMPD1Q9NXG2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
THUMPD1Q9NXG2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
THUMPD1Q9NXG2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
THUMPD1Q9NXG2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
THUMPD1Q9NXG2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
THUMPD1Q9NXG2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
THUMPD1Q9NXG2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
THUMPD1Q9NXG2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
THUMPD1Q9NXG2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
THUMPD1Q9NXG2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.74■□□□□ 0.91
THUMPD1Q9NXG2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.74■□□□□ 0.91
THUMPD1Q9NXG2 AC007375.3-201ENST00000600936 2314 ntBASIC20.74■□□□□ 0.91
THUMPD1Q9NXG2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
THUMPD1Q9NXG2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
THUMPD1Q9NXG2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
THUMPD1Q9NXG2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
THUMPD1Q9NXG2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.74■□□□□ 0.91
THUMPD1Q9NXG2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.74■□□□□ 0.91
THUMPD1Q9NXG2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.73■□□□□ 0.91
THUMPD1Q9NXG2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
THUMPD1Q9NXG2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
THUMPD1Q9NXG2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.73■□□□□ 0.91
THUMPD1Q9NXG2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
THUMPD1Q9NXG2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.73■□□□□ 0.91
THUMPD1Q9NXG2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
THUMPD1Q9NXG2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
THUMPD1Q9NXG2 AC092028.1-203ENST00000608262 953 ntBASIC20.73■□□□□ 0.91
THUMPD1Q9NXG2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.73■□□□□ 0.91
THUMPD1Q9NXG2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
THUMPD1Q9NXG2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
THUMPD1Q9NXG2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
THUMPD1Q9NXG2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.72■□□□□ 0.91
THUMPD1Q9NXG2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
THUMPD1Q9NXG2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
THUMPD1Q9NXG2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
THUMPD1Q9NXG2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.72■□□□□ 0.91
THUMPD1Q9NXG2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
THUMPD1Q9NXG2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
THUMPD1Q9NXG2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
THUMPD1Q9NXG2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
THUMPD1Q9NXG2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms