Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC42SE2Q9NRR3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42SE2Q9NRR3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42SE2Q9NRR3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42SE2Q9NRR3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
CDC42SE2Q9NRR3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42SE2Q9NRR3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42SE2Q9NRR3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42SE2Q9NRR3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC42SE2Q9NRR3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.25■□□□□ 0.03
CDC42SE2Q9NRR3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CDC42SE2Q9NRR3 AC010980.1-201ENST00000587192 1142 ntBASIC15.25■□□□□ 0.03
CDC42SE2Q9NRR3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDC42SE2Q9NRR3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42SE2Q9NRR3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42SE2Q9NRR3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42SE2Q9NRR3 BID-212ENST00000614949 1988 ntTSL 5 BASIC15.25■□□□□ 0.03
CDC42SE2Q9NRR3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 AC080038.3-201ENST00000623346 1952 ntBASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 AC087742.1-201ENST00000575880 1738 ntBASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.24■□□□□ 0.03
CDC42SE2Q9NRR3 AC007375.3-201ENST00000600936 2314 ntBASIC15.23■□□□□ 0.03
CDC42SE2Q9NRR3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.23■□□□□ 0.03
CDC42SE2Q9NRR3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42SE2Q9NRR3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CDC42SE2Q9NRR3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42SE2Q9NRR3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC15.23■□□□□ 0.03
CDC42SE2Q9NRR3 SNX5-217ENST00000606557 1087 ntBASIC15.23■□□□□ 0.03
CDC42SE2Q9NRR3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42SE2Q9NRR3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CDC42SE2Q9NRR3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDC42SE2Q9NRR3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDC42SE2Q9NRR3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42SE2Q9NRR3 TSPY13P-201ENST00000338964 914 ntBASIC15.22■□□□□ 0.03
CDC42SE2Q9NRR3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC15.22■□□□□ 0.03
CDC42SE2Q9NRR3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.22■□□□□ 0.03
CDC42SE2Q9NRR3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC15.22■□□□□ 0.03
CDC42SE2Q9NRR3 MIR4508-201ENST00000584178 70 ntBASIC15.22■□□□□ 0.03
CDC42SE2Q9NRR3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42SE2Q9NRR3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42SE2Q9NRR3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42SE2Q9NRR3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42SE2Q9NRR3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42SE2Q9NRR3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDC42SE2Q9NRR3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42SE2Q9NRR3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42SE2Q9NRR3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC42SE2Q9NRR3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.21■□□□□ 0.03
CDC42SE2Q9NRR3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.21■□□□□ 0.03
CDC42SE2Q9NRR3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDC42SE2Q9NRR3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDC42SE2Q9NRR3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CDC42SE2Q9NRR3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CDC42SE2Q9NRR3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42SE2Q9NRR3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42SE2Q9NRR3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.2■□□□□ 0.02
CDC42SE2Q9NRR3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC42SE2Q9NRR3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42SE2Q9NRR3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC15.2■□□□□ 0.02
CDC42SE2Q9NRR3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC42SE2Q9NRR3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CDC42SE2Q9NRR3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.2■□□□□ 0.02
CDC42SE2Q9NRR3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.2■□□□□ 0.02
CDC42SE2Q9NRR3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42SE2Q9NRR3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDC42SE2Q9NRR3 LINC01529-204ENST00000636474 1715 ntBASIC15.2■□□□□ 0.02
CDC42SE2Q9NRR3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC42SE2Q9NRR3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42SE2Q9NRR3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CDC42SE2Q9NRR3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42SE2Q9NRR3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.19■□□□□ 0.02
CDC42SE2Q9NRR3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC15.19■□□□□ 0.02
CDC42SE2Q9NRR3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.19■□□□□ 0.02
CDC42SE2Q9NRR3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42SE2Q9NRR3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CDC42SE2Q9NRR3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42SE2Q9NRR3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42SE2Q9NRR3 FP325331.1-202ENST00000623531 1380 ntBASIC15.19■□□□□ 0.02
CDC42SE2Q9NRR3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.19■□□□□ 0.02
CDC42SE2Q9NRR3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42SE2Q9NRR3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42SE2Q9NRR3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42SE2Q9NRR3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42SE2Q9NRR3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42SE2Q9NRR3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms