Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMG20AQ9NP66 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HMG20AQ9NP66 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMG20AQ9NP66 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.04■□□□□ 0.8
HMG20AQ9NP66 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.04■□□□□ 0.8
HMG20AQ9NP66 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMG20AQ9NP66 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HMG20AQ9NP66 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMG20AQ9NP66 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HMG20AQ9NP66 RNF126P1-201ENST00000567452 1320 ntBASIC20.03■□□□□ 0.8
HMG20AQ9NP66 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20AQ9NP66 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20AQ9NP66 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20AQ9NP66 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20AQ9NP66 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20AQ9NP66 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.03■□□□□ 0.8
HMG20AQ9NP66 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20AQ9NP66 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.03■□□□□ 0.8
HMG20AQ9NP66 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20AQ9NP66 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20AQ9NP66 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20AQ9NP66 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20AQ9NP66 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
HMG20AQ9NP66 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20AQ9NP66 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.03■□□□□ 0.8
HMG20AQ9NP66 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20AQ9NP66 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20AQ9NP66 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20AQ9NP66 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20AQ9NP66 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20AQ9NP66 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
HMG20AQ9NP66 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20AQ9NP66 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.02■□□□□ 0.8
HMG20AQ9NP66 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.02■□□□□ 0.8
HMG20AQ9NP66 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HMG20AQ9NP66 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
HMG20AQ9NP66 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HMG20AQ9NP66 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20AQ9NP66 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20AQ9NP66 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20AQ9NP66 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20AQ9NP66 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.01■□□□□ 0.79
HMG20AQ9NP66 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.01■□□□□ 0.79
HMG20AQ9NP66 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20AQ9NP66 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20AQ9NP66 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HMG20AQ9NP66 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20AQ9NP66 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20AQ9NP66 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20AQ9NP66 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HMG20AQ9NP66 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20AQ9NP66 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
HMG20AQ9NP66 KRT18P10-201ENST00000388836 1287 ntBASIC20■□□□□ 0.79
HMG20AQ9NP66 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HMG20AQ9NP66 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20■□□□□ 0.79
HMG20AQ9NP66 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMG20AQ9NP66 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HMG20AQ9NP66 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20■□□□□ 0.79
HMG20AQ9NP66 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20AQ9NP66 AC139530.1-201ENST00000575312 1977 ntBASIC19.99■□□□□ 0.79
HMG20AQ9NP66 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
HMG20AQ9NP66 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20AQ9NP66 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.99■□□□□ 0.79
HMG20AQ9NP66 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20AQ9NP66 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20AQ9NP66 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20AQ9NP66 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20AQ9NP66 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
HMG20AQ9NP66 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20AQ9NP66 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HMG20AQ9NP66 AC009831.1-201ENST00000580420 1582 ntBASIC19.99■□□□□ 0.79
HMG20AQ9NP66 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.99■□□□□ 0.79
HMG20AQ9NP66 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20AQ9NP66 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20AQ9NP66 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20AQ9NP66 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20AQ9NP66 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.99■□□□□ 0.79
HMG20AQ9NP66 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20AQ9NP66 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.98■□□□□ 0.79
HMG20AQ9NP66 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20AQ9NP66 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
HMG20AQ9NP66 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.98■□□□□ 0.79
HMG20AQ9NP66 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20AQ9NP66 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20AQ9NP66 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20AQ9NP66 AC133552.2-201ENST00000619106 1032 ntBASIC19.98■□□□□ 0.79
HMG20AQ9NP66 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
HMG20AQ9NP66 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20AQ9NP66 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20AQ9NP66 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20AQ9NP66 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20AQ9NP66 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20AQ9NP66 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HMG20AQ9NP66 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20AQ9NP66 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20AQ9NP66 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20AQ9NP66 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20AQ9NP66 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMG20AQ9NP66 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HMG20AQ9NP66 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
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