Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.2■■□□□ 1.14
MRM3Q9HC36 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
MRM3Q9HC36 LINC00526-201ENST00000581067 1875 ntBASIC22.2■■□□□ 1.14
MRM3Q9HC36 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
MRM3Q9HC36 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
MRM3Q9HC36 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.2■■□□□ 1.14
MRM3Q9HC36 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
MRM3Q9HC36 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
MRM3Q9HC36 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
MRM3Q9HC36 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
MRM3Q9HC36 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
MRM3Q9HC36 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MRM3Q9HC36 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
MRM3Q9HC36 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
MRM3Q9HC36 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
MRM3Q9HC36 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.19■■□□□ 1.14
MRM3Q9HC36 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
MRM3Q9HC36 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.19■■□□□ 1.14
MRM3Q9HC36 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
MRM3Q9HC36 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.18■■□□□ 1.14
MRM3Q9HC36 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
MRM3Q9HC36 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
MRM3Q9HC36 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
MRM3Q9HC36 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MRM3Q9HC36 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.18■■□□□ 1.14
MRM3Q9HC36 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MRM3Q9HC36 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.18■■□□□ 1.14
MRM3Q9HC36 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MRM3Q9HC36 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.18■■□□□ 1.14
MRM3Q9HC36 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
MRM3Q9HC36 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MRM3Q9HC36 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.17■■□□□ 1.14
MRM3Q9HC36 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
MRM3Q9HC36 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.17■■□□□ 1.14
MRM3Q9HC36 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
MRM3Q9HC36 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
MRM3Q9HC36 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.17■■□□□ 1.14
MRM3Q9HC36 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.17■■□□□ 1.14
MRM3Q9HC36 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
MRM3Q9HC36 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MRM3Q9HC36 AL499627.2-201ENST00000606283 725 ntBASIC22.17■■□□□ 1.14
MRM3Q9HC36 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.17■■□□□ 1.14
MRM3Q9HC36 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
MRM3Q9HC36 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
MRM3Q9HC36 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MRM3Q9HC36 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
MRM3Q9HC36 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.17■■□□□ 1.14
MRM3Q9HC36 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MRM3Q9HC36 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.16■■□□□ 1.14
MRM3Q9HC36 AL356441.2-201ENST00000443009 864 ntBASIC22.16■■□□□ 1.14
MRM3Q9HC36 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.16■■□□□ 1.14
MRM3Q9HC36 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
MRM3Q9HC36 AC241377.3-202ENST00000626088 1088 ntBASIC22.16■■□□□ 1.14
MRM3Q9HC36 AC241585.3-202ENST00000628937 1088 ntBASIC22.16■■□□□ 1.14
MRM3Q9HC36 AC245100.8-202ENST00000629247 1058 ntBASIC22.16■■□□□ 1.14
MRM3Q9HC36 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MRM3Q9HC36 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
MRM3Q9HC36 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
MRM3Q9HC36 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MRM3Q9HC36 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
MRM3Q9HC36 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
MRM3Q9HC36 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.15■■□□□ 1.14
MRM3Q9HC36 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.15■■□□□ 1.14
MRM3Q9HC36 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MRM3Q9HC36 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MRM3Q9HC36 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
MRM3Q9HC36 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
MRM3Q9HC36 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
MRM3Q9HC36 EP400NL-214ENST00000641289 2402 ntBASIC22.14■■□□□ 1.13
MRM3Q9HC36 AL356740.2-201ENST00000601559 647 ntBASIC22.14■■□□□ 1.13
MRM3Q9HC36 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MRM3Q9HC36 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
MRM3Q9HC36 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
MRM3Q9HC36 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MRM3Q9HC36 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
MRM3Q9HC36 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MRM3Q9HC36 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MRM3Q9HC36 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
MRM3Q9HC36 AC004687.1-201ENST00000579003 1625 ntBASIC22.13■■□□□ 1.13
MRM3Q9HC36 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MRM3Q9HC36 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MRM3Q9HC36 MIR3621-201ENST00000580529 85 ntBASIC22.13■■□□□ 1.13
MRM3Q9HC36 AC131212.1-201ENST00000613771 668 ntBASIC22.13■■□□□ 1.13
MRM3Q9HC36 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MRM3Q9HC36 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
MRM3Q9HC36 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MRM3Q9HC36 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MRM3Q9HC36 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MRM3Q9HC36 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
MRM3Q9HC36 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MRM3Q9HC36 LINC01960-201ENST00000563759 1884 ntBASIC22.13■■□□□ 1.13
MRM3Q9HC36 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
MRM3Q9HC36 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
MRM3Q9HC36 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
MRM3Q9HC36 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
MRM3Q9HC36 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
MRM3Q9HC36 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
MRM3Q9HC36 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MRM3Q9HC36 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MRM3Q9HC36 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms