Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRTM1Q9HBL6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRTM1Q9HBL6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LRTM1Q9HBL6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.27■□□□□ 0.99
LRTM1Q9HBL6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRTM1Q9HBL6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRTM1Q9HBL6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRTM1Q9HBL6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRTM1Q9HBL6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRTM1Q9HBL6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRTM1Q9HBL6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRTM1Q9HBL6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRTM1Q9HBL6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRTM1Q9HBL6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRTM1Q9HBL6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRTM1Q9HBL6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRTM1Q9HBL6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRTM1Q9HBL6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRTM1Q9HBL6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 MTDHP2-201ENST00000601468 714 ntBASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.25■□□□□ 0.99
LRTM1Q9HBL6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 AC087742.1-201ENST00000575880 1738 ntBASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 MIR4787-201ENST00000607364 84 ntBASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRTM1Q9HBL6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
LRTM1Q9HBL6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRTM1Q9HBL6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRTM1Q9HBL6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRTM1Q9HBL6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRTM1Q9HBL6 RARRES2P1-201ENST00000474487 481 ntBASIC21.23■□□□□ 0.99
LRTM1Q9HBL6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRTM1Q9HBL6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRTM1Q9HBL6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRTM1Q9HBL6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.23■□□□□ 0.99
LRTM1Q9HBL6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRTM1Q9HBL6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRTM1Q9HBL6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRTM1Q9HBL6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.23■□□□□ 0.99
LRTM1Q9HBL6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.23■□□□□ 0.99
LRTM1Q9HBL6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LRTM1Q9HBL6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRTM1Q9HBL6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRTM1Q9HBL6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.22■□□□□ 0.99
LRTM1Q9HBL6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRTM1Q9HBL6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRTM1Q9HBL6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.22■□□□□ 0.99
LRTM1Q9HBL6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRTM1Q9HBL6 DUX4L4-201ENST00000566884 1269 ntBASIC21.22■□□□□ 0.99
LRTM1Q9HBL6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRTM1Q9HBL6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LRTM1Q9HBL6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
LRTM1Q9HBL6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRTM1Q9HBL6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRTM1Q9HBL6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRTM1Q9HBL6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRTM1Q9HBL6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRTM1Q9HBL6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LRTM1Q9HBL6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
LRTM1Q9HBL6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRTM1Q9HBL6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
LRTM1Q9HBL6 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.21■□□□□ 0.99
LRTM1Q9HBL6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRTM1Q9HBL6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LRTM1Q9HBL6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRTM1Q9HBL6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LRTM1Q9HBL6 AC139530.1-201ENST00000575312 1977 ntBASIC21.21■□□□□ 0.99
LRTM1Q9HBL6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRTM1Q9HBL6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRTM1Q9HBL6 CLDN5-201ENST00000403084 2357 ntBASIC21.21■□□□□ 0.99
LRTM1Q9HBL6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms