Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.9■■□□□ 1.74
SH2D4AQ9H788 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.9■■□□□ 1.74
SH2D4AQ9H788 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
SH2D4AQ9H788 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.9■■□□□ 1.74
SH2D4AQ9H788 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SH2D4AQ9H788 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.9■■□□□ 1.74
SH2D4AQ9H788 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SH2D4AQ9H788 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.9■■□□□ 1.74
SH2D4AQ9H788 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.9■■□□□ 1.74
SH2D4AQ9H788 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.9■■□□□ 1.74
SH2D4AQ9H788 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.89■■□□□ 1.74
SH2D4AQ9H788 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SH2D4AQ9H788 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SH2D4AQ9H788 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.89■■□□□ 1.74
SH2D4AQ9H788 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SH2D4AQ9H788 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.89■■□□□ 1.74
SH2D4AQ9H788 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SH2D4AQ9H788 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SH2D4AQ9H788 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.89■■□□□ 1.74
SH2D4AQ9H788 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SH2D4AQ9H788 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
SH2D4AQ9H788 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
SH2D4AQ9H788 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.89■■□□□ 1.73
SH2D4AQ9H788 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.88■■□□□ 1.73
SH2D4AQ9H788 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
SH2D4AQ9H788 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.88■■□□□ 1.73
SH2D4AQ9H788 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SH2D4AQ9H788 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SH2D4AQ9H788 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
SH2D4AQ9H788 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
SH2D4AQ9H788 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SH2D4AQ9H788 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SH2D4AQ9H788 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.87■■□□□ 1.73
SH2D4AQ9H788 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
SH2D4AQ9H788 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.87■■□□□ 1.73
SH2D4AQ9H788 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.87■■□□□ 1.73
SH2D4AQ9H788 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.87■■□□□ 1.73
SH2D4AQ9H788 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.87■■□□□ 1.73
SH2D4AQ9H788 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SH2D4AQ9H788 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SH2D4AQ9H788 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.86■■□□□ 1.73
SH2D4AQ9H788 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.86■■□□□ 1.73
SH2D4AQ9H788 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.86■■□□□ 1.73
SH2D4AQ9H788 MIR6084-201ENST00000622012 110 ntBASIC25.86■■□□□ 1.73
SH2D4AQ9H788 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.85■■□□□ 1.73
SH2D4AQ9H788 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
SH2D4AQ9H788 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
SH2D4AQ9H788 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SH2D4AQ9H788 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.85■■□□□ 1.73
SH2D4AQ9H788 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SH2D4AQ9H788 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.85■■□□□ 1.73
SH2D4AQ9H788 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SH2D4AQ9H788 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SH2D4AQ9H788 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SH2D4AQ9H788 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SH2D4AQ9H788 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SH2D4AQ9H788 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SH2D4AQ9H788 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.84■■□□□ 1.73
SH2D4AQ9H788 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
SH2D4AQ9H788 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.83■■□□□ 1.73
SH2D4AQ9H788 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.83■■□□□ 1.73
SH2D4AQ9H788 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.83■■□□□ 1.73
SH2D4AQ9H788 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
SH2D4AQ9H788 AL031602.1-201ENST00000633169 911 ntBASIC25.83■■□□□ 1.73
SH2D4AQ9H788 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.83■■□□□ 1.73
SH2D4AQ9H788 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
SH2D4AQ9H788 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SH2D4AQ9H788 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SH2D4AQ9H788 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
SH2D4AQ9H788 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SH2D4AQ9H788 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SH2D4AQ9H788 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
SH2D4AQ9H788 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.82■■□□□ 1.72
SH2D4AQ9H788 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.82■■□□□ 1.72
SH2D4AQ9H788 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SH2D4AQ9H788 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.82■■□□□ 1.72
SH2D4AQ9H788 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SH2D4AQ9H788 AC068587.7-201ENST00000641602 218 ntBASIC25.82■■□□□ 1.72
SH2D4AQ9H788 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.82■■□□□ 1.72
SH2D4AQ9H788 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SH2D4AQ9H788 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.82■■□□□ 1.72
SH2D4AQ9H788 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SH2D4AQ9H788 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
SH2D4AQ9H788 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.81■■□□□ 1.72
SH2D4AQ9H788 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SH2D4AQ9H788 AC105233.4-201ENST00000642045 216 ntBASIC25.81■■□□□ 1.72
SH2D4AQ9H788 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.81■■□□□ 1.72
SH2D4AQ9H788 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SH2D4AQ9H788 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
SH2D4AQ9H788 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC25.8■■□□□ 1.72
SH2D4AQ9H788 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SH2D4AQ9H788 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SH2D4AQ9H788 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SH2D4AQ9H788 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SH2D4AQ9H788 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SH2D4AQ9H788 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.8■■□□□ 1.72
SH2D4AQ9H788 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SH2D4AQ9H788 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SH2D4AQ9H788 AC004687.1-201ENST00000579003 1625 ntBASIC25.8■■□□□ 1.72
SH2D4AQ9H788 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms