Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
PIF1Q9H611 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PIF1Q9H611 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PIF1Q9H611 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PIF1Q9H611 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PIF1Q9H611 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.07■□□□□ 0.96
PIF1Q9H611 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PIF1Q9H611 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.07■□□□□ 0.96
PIF1Q9H611 AL033527.3-201ENST00000566366 1196 ntBASIC21.07■□□□□ 0.96
PIF1Q9H611 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PIF1Q9H611 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PIF1Q9H611 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PIF1Q9H611 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PIF1Q9H611 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.06■□□□□ 0.96
PIF1Q9H611 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.06■□□□□ 0.96
PIF1Q9H611 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
PIF1Q9H611 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PIF1Q9H611 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PIF1Q9H611 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.06■□□□□ 0.96
PIF1Q9H611 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PIF1Q9H611 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.06■□□□□ 0.96
PIF1Q9H611 BHLHE23-202ENST00000612929 1109 ntBASIC21.06■□□□□ 0.96
PIF1Q9H611 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PIF1Q9H611 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PIF1Q9H611 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PIF1Q9H611 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PIF1Q9H611 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PIF1Q9H611 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.06■□□□□ 0.96
PIF1Q9H611 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PIF1Q9H611 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PIF1Q9H611 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PIF1Q9H611 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PIF1Q9H611 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PIF1Q9H611 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PIF1Q9H611 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PIF1Q9H611 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PIF1Q9H611 AC080038.3-201ENST00000623346 1952 ntBASIC21.05■□□□□ 0.96
PIF1Q9H611 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.05■□□□□ 0.96
PIF1Q9H611 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PIF1Q9H611 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.05■□□□□ 0.96
PIF1Q9H611 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PIF1Q9H611 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PIF1Q9H611 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PIF1Q9H611 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.05■□□□□ 0.96
PIF1Q9H611 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.05■□□□□ 0.96
PIF1Q9H611 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.05■□□□□ 0.96
PIF1Q9H611 AC139530.1-201ENST00000575312 1977 ntBASIC21.05■□□□□ 0.96
PIF1Q9H611 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PIF1Q9H611 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.04■□□□□ 0.96
PIF1Q9H611 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PIF1Q9H611 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PIF1Q9H611 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
PIF1Q9H611 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.04■□□□□ 0.96
PIF1Q9H611 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PIF1Q9H611 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.04■□□□□ 0.96
PIF1Q9H611 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.04■□□□□ 0.96
PIF1Q9H611 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.04■□□□□ 0.96
PIF1Q9H611 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.04■□□□□ 0.96
PIF1Q9H611 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PIF1Q9H611 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PIF1Q9H611 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PIF1Q9H611 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PIF1Q9H611 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PIF1Q9H611 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PIF1Q9H611 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PIF1Q9H611 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PIF1Q9H611 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PIF1Q9H611 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.03■□□□□ 0.96
PIF1Q9H611 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PIF1Q9H611 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PIF1Q9H611 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PIF1Q9H611 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PIF1Q9H611 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PIF1Q9H611 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PIF1Q9H611 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.03■□□□□ 0.96
PIF1Q9H611 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PIF1Q9H611 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PIF1Q9H611 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PIF1Q9H611 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PIF1Q9H611 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PIF1Q9H611 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PIF1Q9H611 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.02■□□□□ 0.96
PIF1Q9H611 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PIF1Q9H611 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.02■□□□□ 0.96
PIF1Q9H611 FBXW4P1-201ENST00000426721 2239 ntBASIC21.02■□□□□ 0.96
PIF1Q9H611 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
PIF1Q9H611 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PIF1Q9H611 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
PIF1Q9H611 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.02■□□□□ 0.95
PIF1Q9H611 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
PIF1Q9H611 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PIF1Q9H611 AC092053.2-201ENST00000640557 1818 ntBASIC21.01■□□□□ 0.95
PIF1Q9H611 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PIF1Q9H611 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PIF1Q9H611 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.01■□□□□ 0.95
PIF1Q9H611 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.01■□□□□ 0.95
PIF1Q9H611 MIR4281-201ENST00000580852 62 ntBASIC21.01■□□□□ 0.95
PIF1Q9H611 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PIF1Q9H611 C11orf96-202ENST00000528572 1834 ntBASIC21.01■□□□□ 0.95
PIF1Q9H611 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms