Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RNF41Q9H4P4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.19■■□□□ 1.78
RNF41Q9H4P4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.19■■□□□ 1.78
RNF41Q9H4P4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.19■■□□□ 1.78
RNF41Q9H4P4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RNF41Q9H4P4 OR2I1P-207ENST00000453522 948 ntBASIC26.19■■□□□ 1.78
RNF41Q9H4P4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.19■■□□□ 1.78
RNF41Q9H4P4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.19■■□□□ 1.78
RNF41Q9H4P4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
RNF41Q9H4P4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
RNF41Q9H4P4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RNF41Q9H4P4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RNF41Q9H4P4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
RNF41Q9H4P4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RNF41Q9H4P4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.18■■□□□ 1.78
RNF41Q9H4P4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RNF41Q9H4P4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
RNF41Q9H4P4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
RNF41Q9H4P4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RNF41Q9H4P4 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.18■■□□□ 1.78
RNF41Q9H4P4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RNF41Q9H4P4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RNF41Q9H4P4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RNF41Q9H4P4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.17■■□□□ 1.78
RNF41Q9H4P4 AL031432.3-201ENST00000607698 485 ntBASIC26.17■■□□□ 1.78
RNF41Q9H4P4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.17■■□□□ 1.78
RNF41Q9H4P4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RNF41Q9H4P4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.16■■□□□ 1.78
RNF41Q9H4P4 BX842568.3-201ENST00000418104 571 ntBASIC26.16■■□□□ 1.78
RNF41Q9H4P4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.16■■□□□ 1.78
RNF41Q9H4P4 AC005837.3-201ENST00000612163 286 ntBASIC26.16■■□□□ 1.78
RNF41Q9H4P4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RNF41Q9H4P4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RNF41Q9H4P4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RNF41Q9H4P4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
RNF41Q9H4P4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
RNF41Q9H4P4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RNF41Q9H4P4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
RNF41Q9H4P4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RNF41Q9H4P4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
RNF41Q9H4P4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RNF41Q9H4P4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.14■■□□□ 1.78
RNF41Q9H4P4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RNF41Q9H4P4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RNF41Q9H4P4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
RNF41Q9H4P4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RNF41Q9H4P4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RNF41Q9H4P4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
RNF41Q9H4P4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.13■■□□□ 1.77
RNF41Q9H4P4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
RNF41Q9H4P4 AP001330.3-201ENST00000520123 633 ntBASIC26.13■■□□□ 1.77
RNF41Q9H4P4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
RNF41Q9H4P4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RNF41Q9H4P4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.12■■□□□ 1.77
RNF41Q9H4P4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.12■■□□□ 1.77
RNF41Q9H4P4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
RNF41Q9H4P4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.12■■□□□ 1.77
RNF41Q9H4P4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF41Q9H4P4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.12■■□□□ 1.77
RNF41Q9H4P4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RNF41Q9H4P4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RNF41Q9H4P4 SLC47A1P1-202ENST00000449666 945 ntBASIC26.12■■□□□ 1.77
RNF41Q9H4P4 SUDS3P1-201ENST00000505831 966 ntBASIC26.12■■□□□ 1.77
RNF41Q9H4P4 AC027682.1-201ENST00000562846 899 ntBASIC26.12■■□□□ 1.77
RNF41Q9H4P4 AC233992.3-201ENST00000607491 485 ntBASIC26.12■■□□□ 1.77
RNF41Q9H4P4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.12■■□□□ 1.77
RNF41Q9H4P4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF41Q9H4P4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RNF41Q9H4P4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RNF41Q9H4P4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
RNF41Q9H4P4 MIR939-201ENST00000401314 82 ntBASIC26.11■■□□□ 1.77
RNF41Q9H4P4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.11■■□□□ 1.77
RNF41Q9H4P4 AF213884.3-201ENST00000563833 479 ntBASIC26.11■■□□□ 1.77
RNF41Q9H4P4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
RNF41Q9H4P4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
RNF41Q9H4P4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF41Q9H4P4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.1■■□□□ 1.77
RNF41Q9H4P4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RNF41Q9H4P4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RNF41Q9H4P4 AC142381.2-201ENST00000566120 298 ntBASIC26.1■■□□□ 1.77
RNF41Q9H4P4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
RNF41Q9H4P4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RNF41Q9H4P4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
RNF41Q9H4P4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.09■■□□□ 1.77
RNF41Q9H4P4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
RNF41Q9H4P4 AC091305.1-201ENST00000479476 895 ntBASIC26.09■■□□□ 1.77
RNF41Q9H4P4 AL136967.2-201ENST00000623968 743 ntBASIC26.09■■□□□ 1.77
RNF41Q9H4P4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
RNF41Q9H4P4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.09■■□□□ 1.77
RNF41Q9H4P4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RNF41Q9H4P4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.09■■□□□ 1.77
RNF41Q9H4P4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.09■■□□□ 1.77
RNF41Q9H4P4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF41Q9H4P4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.08■■□□□ 1.77
RNF41Q9H4P4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.08■■□□□ 1.77
RNF41Q9H4P4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.08■■□□□ 1.77
RNF41Q9H4P4 AC010525.1-201ENST00000585559 441 ntBASIC26.08■■□□□ 1.77
RNF41Q9H4P4 AC008764.7-201ENST00000593779 1081 ntBASIC26.08■■□□□ 1.77
RNF41Q9H4P4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.08■■□□□ 1.77
RNF41Q9H4P4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms