Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CDC42EP4Q9H3Q1 AC144652.1-201ENST00000609974 1624 ntBASIC22.56■■□□□ 1.2
CDC42EP4Q9H3Q1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42EP4Q9H3Q1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42EP4Q9H3Q1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42EP4Q9H3Q1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42EP4Q9H3Q1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42EP4Q9H3Q1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42EP4Q9H3Q1 DUX4L18-201ENST00000553347 1267 ntBASIC22.55■■□□□ 1.2
CDC42EP4Q9H3Q1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.55■■□□□ 1.2
CDC42EP4Q9H3Q1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.55■■□□□ 1.2
CDC42EP4Q9H3Q1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42EP4Q9H3Q1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42EP4Q9H3Q1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42EP4Q9H3Q1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CDC42EP4Q9H3Q1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CDC42EP4Q9H3Q1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CDC42EP4Q9H3Q1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42EP4Q9H3Q1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42EP4Q9H3Q1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CDC42EP4Q9H3Q1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.54■■□□□ 1.2
CDC42EP4Q9H3Q1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.54■■□□□ 1.2
CDC42EP4Q9H3Q1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42EP4Q9H3Q1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.53■■□□□ 1.2
CDC42EP4Q9H3Q1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42EP4Q9H3Q1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42EP4Q9H3Q1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CDC42EP4Q9H3Q1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42EP4Q9H3Q1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42EP4Q9H3Q1 KRT18P24-201ENST00000344739 1156 ntBASIC22.53■■□□□ 1.2
CDC42EP4Q9H3Q1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.53■■□□□ 1.2
CDC42EP4Q9H3Q1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42EP4Q9H3Q1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.53■■□□□ 1.2
CDC42EP4Q9H3Q1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42EP4Q9H3Q1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42EP4Q9H3Q1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42EP4Q9H3Q1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CDC42EP4Q9H3Q1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.53■■□□□ 1.2
CDC42EP4Q9H3Q1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.53■■□□□ 1.2
CDC42EP4Q9H3Q1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42EP4Q9H3Q1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42EP4Q9H3Q1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42EP4Q9H3Q1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42EP4Q9H3Q1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42EP4Q9H3Q1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42EP4Q9H3Q1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
CDC42EP4Q9H3Q1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.52■■□□□ 1.2
CDC42EP4Q9H3Q1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42EP4Q9H3Q1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42EP4Q9H3Q1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.52■■□□□ 1.19
CDC42EP4Q9H3Q1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
CDC42EP4Q9H3Q1 AC026310.3-201ENST00000625186 2373 ntBASIC22.52■■□□□ 1.19
CDC42EP4Q9H3Q1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.51■■□□□ 1.19
CDC42EP4Q9H3Q1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42EP4Q9H3Q1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42EP4Q9H3Q1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.51■■□□□ 1.19
CDC42EP4Q9H3Q1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42EP4Q9H3Q1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.51■■□□□ 1.19
CDC42EP4Q9H3Q1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.51■■□□□ 1.19
CDC42EP4Q9H3Q1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42EP4Q9H3Q1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42EP4Q9H3Q1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CDC42EP4Q9H3Q1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42EP4Q9H3Q1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.51■■□□□ 1.19
CDC42EP4Q9H3Q1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42EP4Q9H3Q1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.5■■□□□ 1.19
CDC42EP4Q9H3Q1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.5■■□□□ 1.19
CDC42EP4Q9H3Q1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CDC42EP4Q9H3Q1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42EP4Q9H3Q1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CDC42EP4Q9H3Q1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42EP4Q9H3Q1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42EP4Q9H3Q1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42EP4Q9H3Q1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42EP4Q9H3Q1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42EP4Q9H3Q1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42EP4Q9H3Q1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CDC42EP4Q9H3Q1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.49■■□□□ 1.19
CDC42EP4Q9H3Q1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.49■■□□□ 1.19
CDC42EP4Q9H3Q1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42EP4Q9H3Q1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.49■■□□□ 1.19
CDC42EP4Q9H3Q1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42EP4Q9H3Q1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42EP4Q9H3Q1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CDC42EP4Q9H3Q1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42EP4Q9H3Q1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
CDC42EP4Q9H3Q1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42EP4Q9H3Q1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42EP4Q9H3Q1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDC42EP4Q9H3Q1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CDC42EP4Q9H3Q1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42EP4Q9H3Q1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42EP4Q9H3Q1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42EP4Q9H3Q1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.48■■□□□ 1.19
CDC42EP4Q9H3Q1 PVT1_1.1-201ENST00000615125 194 ntBASIC22.48■■□□□ 1.19
CDC42EP4Q9H3Q1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42EP4Q9H3Q1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.48■■□□□ 1.19
CDC42EP4Q9H3Q1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42EP4Q9H3Q1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDC42EP4Q9H3Q1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms