Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MED28Q9H204 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MED28Q9H204 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
MED28Q9H204 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
MED28Q9H204 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
MED28Q9H204 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MED28Q9H204 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.86■□□□□ 0.61
MED28Q9H204 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MED28Q9H204 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MED28Q9H204 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MED28Q9H204 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.86■□□□□ 0.61
MED28Q9H204 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MED28Q9H204 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.85■□□□□ 0.61
MED28Q9H204 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
MED28Q9H204 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MED28Q9H204 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
MED28Q9H204 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MED28Q9H204 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MED28Q9H204 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
MED28Q9H204 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MED28Q9H204 AC148477.6-201ENST00000623746 465 ntBASIC18.85■□□□□ 0.61
MED28Q9H204 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MED28Q9H204 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.85■□□□□ 0.61
MED28Q9H204 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MED28Q9H204 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
MED28Q9H204 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.85■□□□□ 0.61
MED28Q9H204 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MED28Q9H204 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MED28Q9H204 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
MED28Q9H204 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.85■□□□□ 0.61
MED28Q9H204 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MED28Q9H204 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MED28Q9H204 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
MED28Q9H204 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MED28Q9H204 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MED28Q9H204 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MED28Q9H204 AC007952.6-201ENST00000573168 2673 ntBASIC18.84■□□□□ 0.61
MED28Q9H204 AC003957.1-201ENST00000625108 2673 ntBASIC18.84■□□□□ 0.61
MED28Q9H204 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
MED28Q9H204 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MED28Q9H204 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.83■□□□□ 0.61
MED28Q9H204 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MED28Q9H204 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
MED28Q9H204 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MED28Q9H204 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MED28Q9H204 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MED28Q9H204 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MED28Q9H204 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.83■□□□□ 0.6
MED28Q9H204 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MED28Q9H204 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
MED28Q9H204 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MED28Q9H204 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
MED28Q9H204 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MED28Q9H204 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.83■□□□□ 0.6
MED28Q9H204 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.83■□□□□ 0.6
MED28Q9H204 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
MED28Q9H204 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.83■□□□□ 0.6
MED28Q9H204 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MED28Q9H204 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.82■□□□□ 0.6
MED28Q9H204 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MED28Q9H204 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MED28Q9H204 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MED28Q9H204 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.82■□□□□ 0.6
MED28Q9H204 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MED28Q9H204 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
MED28Q9H204 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
MED28Q9H204 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MED28Q9H204 AC008813.1-201ENST00000536597 885 ntBASIC18.82■□□□□ 0.6
MED28Q9H204 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MED28Q9H204 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MED28Q9H204 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.82■□□□□ 0.6
MED28Q9H204 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MED28Q9H204 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MED28Q9H204 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MED28Q9H204 AL157384.1-201ENST00000445995 2473 ntBASIC18.81■□□□□ 0.6
MED28Q9H204 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MED28Q9H204 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MED28Q9H204 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MED28Q9H204 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MED28Q9H204 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MED28Q9H204 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MED28Q9H204 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MED28Q9H204 SUZ12P1-203ENST00000578195 985 ntBASIC18.81■□□□□ 0.6
MED28Q9H204 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MED28Q9H204 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.81■□□□□ 0.6
MED28Q9H204 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.81■□□□□ 0.6
MED28Q9H204 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MED28Q9H204 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MED28Q9H204 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MED28Q9H204 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
MED28Q9H204 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
MED28Q9H204 AC010542.4-201ENST00000563151 1910 ntBASIC18.8■□□□□ 0.6
MED28Q9H204 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.8■□□□□ 0.6
MED28Q9H204 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MED28Q9H204 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MED28Q9H204 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.8■□□□□ 0.6
MED28Q9H204 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MED28Q9H204 AL391422.3-201ENST00000603791 2761 ntBASIC18.8■□□□□ 0.6
MED28Q9H204 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MED28Q9H204 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms