Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.21■■□□□ 1.15
CLPBQ9H078 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.21■■□□□ 1.15
CLPBQ9H078 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CLPBQ9H078 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CLPBQ9H078 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLPBQ9H078 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.21■■□□□ 1.15
CLPBQ9H078 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CLPBQ9H078 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CLPBQ9H078 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLPBQ9H078 AC144652.1-201ENST00000609974 1624 ntBASIC22.2■■□□□ 1.15
CLPBQ9H078 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
CLPBQ9H078 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.2■■□□□ 1.14
CLPBQ9H078 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.2■■□□□ 1.14
CLPBQ9H078 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.2■■□□□ 1.14
CLPBQ9H078 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.2■■□□□ 1.14
CLPBQ9H078 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.2■■□□□ 1.14
CLPBQ9H078 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.2■■□□□ 1.14
CLPBQ9H078 AL138724.1-201ENST00000606771 1088 ntBASIC22.2■■□□□ 1.14
CLPBQ9H078 AC011298.3-201ENST00000615796 283 ntBASIC22.2■■□□□ 1.14
CLPBQ9H078 AC241377.3-202ENST00000626088 1088 ntBASIC22.2■■□□□ 1.14
CLPBQ9H078 AC241585.3-202ENST00000628937 1088 ntBASIC22.2■■□□□ 1.14
CLPBQ9H078 AC245100.8-202ENST00000629247 1058 ntBASIC22.2■■□□□ 1.14
CLPBQ9H078 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLPBQ9H078 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
CLPBQ9H078 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.2■■□□□ 1.14
CLPBQ9H078 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLPBQ9H078 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CLPBQ9H078 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLPBQ9H078 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.2■■□□□ 1.14
CLPBQ9H078 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLPBQ9H078 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CLPBQ9H078 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLPBQ9H078 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLPBQ9H078 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.19■■□□□ 1.14
CLPBQ9H078 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLPBQ9H078 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLPBQ9H078 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CLPBQ9H078 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.18■■□□□ 1.14
CLPBQ9H078 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLPBQ9H078 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CLPBQ9H078 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLPBQ9H078 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CLPBQ9H078 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLPBQ9H078 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.18■■□□□ 1.14
CLPBQ9H078 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CLPBQ9H078 AC091305.1-201ENST00000479476 895 ntBASIC22.18■■□□□ 1.14
CLPBQ9H078 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.18■■□□□ 1.14
CLPBQ9H078 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.18■■□□□ 1.14
CLPBQ9H078 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.18■■□□□ 1.14
CLPBQ9H078 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CLPBQ9H078 RARRES2P6-201ENST00000567333 442 ntBASIC22.18■■□□□ 1.14
CLPBQ9H078 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.18■■□□□ 1.14
CLPBQ9H078 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CLPBQ9H078 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.17■■□□□ 1.14
CLPBQ9H078 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.17■■□□□ 1.14
CLPBQ9H078 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.17■■□□□ 1.14
CLPBQ9H078 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLPBQ9H078 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.17■■□□□ 1.14
CLPBQ9H078 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.17■■□□□ 1.14
CLPBQ9H078 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLPBQ9H078 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.17■■□□□ 1.14
CLPBQ9H078 AL353803.4-201ENST00000565882 1934 ntBASIC22.17■■□□□ 1.14
CLPBQ9H078 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CLPBQ9H078 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLPBQ9H078 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLPBQ9H078 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLPBQ9H078 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLPBQ9H078 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CLPBQ9H078 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLPBQ9H078 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CLPBQ9H078 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLPBQ9H078 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CLPBQ9H078 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLPBQ9H078 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.15■■□□□ 1.14
CLPBQ9H078 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLPBQ9H078 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.15■■□□□ 1.14
CLPBQ9H078 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.15■■□□□ 1.14
CLPBQ9H078 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLPBQ9H078 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLPBQ9H078 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.15■■□□□ 1.14
CLPBQ9H078 MIR3181-201ENST00000578512 73 ntBASIC22.15■■□□□ 1.14
CLPBQ9H078 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CLPBQ9H078 CA15P2-201ENST00000611168 834 ntBASIC22.15■■□□□ 1.14
CLPBQ9H078 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.15■■□□□ 1.14
CLPBQ9H078 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.15■■□□□ 1.14
CLPBQ9H078 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLPBQ9H078 AC009086.3-201ENST00000623486 1008 ntBASIC22.15■■□□□ 1.14
CLPBQ9H078 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLPBQ9H078 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.15■■□□□ 1.14
CLPBQ9H078 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CLPBQ9H078 FP325331.1-202ENST00000623531 1380 ntBASIC22.14■■□□□ 1.14
CLPBQ9H078 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
CLPBQ9H078 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CLPBQ9H078 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.14
CLPBQ9H078 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.14■■□□□ 1.13
CLPBQ9H078 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLPBQ9H078 AC026271.2-201ENST00000428091 497 ntBASIC22.14■■□□□ 1.13
CLPBQ9H078 AC008764.7-201ENST00000593779 1081 ntBASIC22.14■■□□□ 1.13
CLPBQ9H078 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.14■■□□□ 1.13
CLPBQ9H078 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms