Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 FAM99A-202ENST00000538190 1989 ntBASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
KRTAP3-1Q9BYR8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 AC144652.1-201ENST00000609974 1624 ntBASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KRTAP3-1Q9BYR8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 MIR4281-201ENST00000580852 62 ntBASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP3-1Q9BYR8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 KRT18P24-201ENST00000344739 1156 ntBASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 RARRES2P2-201ENST00000394842 485 ntBASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 HYI-210ENST00000486909 905 ntTSL 5 BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 DUX4L18-201ENST00000553347 1267 ntBASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 THA1P-201ENST00000590384 1145 ntBASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 PVT1_1.1-201ENST00000615125 194 ntBASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP3-1Q9BYR8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC11.21□□□□□ -0.62
KRTAP3-1Q9BYR8 SLC25A24-204ENST00000569674 2357 ntBASIC11.21□□□□□ -0.62
KRTAP3-1Q9BYR8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC11.21□□□□□ -0.62
KRTAP3-1Q9BYR8 AC005229.4-201ENST00000610085 2198 ntBASIC11.21□□□□□ -0.62
KRTAP3-1Q9BYR8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
KRTAP3-1Q9BYR8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
KRTAP3-1Q9BYR8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
KRTAP3-1Q9BYR8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC11.21□□□□□ -0.62
KRTAP3-1Q9BYR8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC11.21□□□□□ -0.62
KRTAP3-1Q9BYR8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
KRTAP3-1Q9BYR8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms