Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPPED1Q9BRF8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CPPED1Q9BRF8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPPED1Q9BRF8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPPED1Q9BRF8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.85■□□□□ 0.93
CPPED1Q9BRF8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPPED1Q9BRF8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPPED1Q9BRF8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPPED1Q9BRF8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPPED1Q9BRF8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPPED1Q9BRF8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPPED1Q9BRF8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CPPED1Q9BRF8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CPPED1Q9BRF8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CPPED1Q9BRF8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CPPED1Q9BRF8 AC103724.3-201ENST00000564481 992 ntBASIC20.84■□□□□ 0.93
CPPED1Q9BRF8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.84■□□□□ 0.93
CPPED1Q9BRF8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.84■□□□□ 0.93
CPPED1Q9BRF8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CPPED1Q9BRF8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPPED1Q9BRF8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.84■□□□□ 0.93
CPPED1Q9BRF8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPPED1Q9BRF8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPPED1Q9BRF8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CPPED1Q9BRF8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPPED1Q9BRF8 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.83■□□□□ 0.93
CPPED1Q9BRF8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPPED1Q9BRF8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.83■□□□□ 0.93
CPPED1Q9BRF8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPPED1Q9BRF8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.83■□□□□ 0.93
CPPED1Q9BRF8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.83■□□□□ 0.93
CPPED1Q9BRF8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPPED1Q9BRF8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPPED1Q9BRF8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CPPED1Q9BRF8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPPED1Q9BRF8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPPED1Q9BRF8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPPED1Q9BRF8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPPED1Q9BRF8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.82■□□□□ 0.92
CPPED1Q9BRF8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
CPPED1Q9BRF8 AC137630.3-201ENST00000607245 391 ntBASIC20.82■□□□□ 0.92
CPPED1Q9BRF8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.82■□□□□ 0.92
CPPED1Q9BRF8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.82■□□□□ 0.92
CPPED1Q9BRF8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CPPED1Q9BRF8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPPED1Q9BRF8 LINC01529-204ENST00000636474 1715 ntBASIC20.81■□□□□ 0.92
CPPED1Q9BRF8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPPED1Q9BRF8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPPED1Q9BRF8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CPPED1Q9BRF8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPPED1Q9BRF8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPPED1Q9BRF8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.81■□□□□ 0.92
CPPED1Q9BRF8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPPED1Q9BRF8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPPED1Q9BRF8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CPPED1Q9BRF8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPPED1Q9BRF8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPPED1Q9BRF8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
CPPED1Q9BRF8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPPED1Q9BRF8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPPED1Q9BRF8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPPED1Q9BRF8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPPED1Q9BRF8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.8■□□□□ 0.92
CPPED1Q9BRF8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CPPED1Q9BRF8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPPED1Q9BRF8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.8■□□□□ 0.92
CPPED1Q9BRF8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.8■□□□□ 0.92
CPPED1Q9BRF8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.8■□□□□ 0.92
CPPED1Q9BRF8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPPED1Q9BRF8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.8■□□□□ 0.92
CPPED1Q9BRF8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPPED1Q9BRF8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPPED1Q9BRF8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CPPED1Q9BRF8 KRT8P33-201ENST00000508125 1423 ntBASIC20.79■□□□□ 0.92
CPPED1Q9BRF8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.79■□□□□ 0.92
CPPED1Q9BRF8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CPPED1Q9BRF8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CPPED1Q9BRF8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.79■□□□□ 0.92
CPPED1Q9BRF8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.79■□□□□ 0.92
CPPED1Q9BRF8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.79■□□□□ 0.92
CPPED1Q9BRF8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.79■□□□□ 0.92
CPPED1Q9BRF8 FP325331.1-202ENST00000623531 1380 ntBASIC20.79■□□□□ 0.92
CPPED1Q9BRF8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPPED1Q9BRF8 AC005703.6-201ENST00000623265 1329 ntBASIC20.78■□□□□ 0.92
CPPED1Q9BRF8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.78■□□□□ 0.92
CPPED1Q9BRF8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPPED1Q9BRF8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.78■□□□□ 0.92
CPPED1Q9BRF8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CPPED1Q9BRF8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CPPED1Q9BRF8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.78■□□□□ 0.92
CPPED1Q9BRF8 AC012354.3-201ENST00000623734 483 ntBASIC20.78■□□□□ 0.92
CPPED1Q9BRF8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.78■□□□□ 0.92
CPPED1Q9BRF8 FBXW4P1-201ENST00000426721 2239 ntBASIC20.78■□□□□ 0.92
CPPED1Q9BRF8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CPPED1Q9BRF8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPPED1Q9BRF8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPPED1Q9BRF8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPPED1Q9BRF8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CPPED1Q9BRF8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPPED1Q9BRF8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms