Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC096631.2-201ENST00000436136 790 ntBASIC20.17■□□□□ 0.82
NPAS1Q99742 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.17■□□□□ 0.82
NPAS1Q99742 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.17■□□□□ 0.82
NPAS1Q99742 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.17■□□□□ 0.82
NPAS1Q99742 pRNA.6-201ENST00000610482 90 ntBASIC20.17■□□□□ 0.82
NPAS1Q99742 pRNA.5-201ENST00000612139 90 ntBASIC20.17■□□□□ 0.82
NPAS1Q99742 pRNA.11-201ENST00000618423 90 ntBASIC20.17■□□□□ 0.82
NPAS1Q99742 pRNA.13-201ENST00000619112 90 ntBASIC20.17■□□□□ 0.82
NPAS1Q99742 AC241377.3-202ENST00000626088 1088 ntBASIC20.17■□□□□ 0.82
NPAS1Q99742 AC241585.3-202ENST00000628937 1088 ntBASIC20.17■□□□□ 0.82
NPAS1Q99742 AC245100.8-202ENST00000629247 1058 ntBASIC20.17■□□□□ 0.82
NPAS1Q99742 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPAS1Q99742 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPAS1Q99742 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
NPAS1Q99742 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
NPAS1Q99742 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS1Q99742 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS1Q99742 UNC93B3-201ENST00000308076 687 ntBASIC20.16■□□□□ 0.82
NPAS1Q99742 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.16■□□□□ 0.82
NPAS1Q99742 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.16■□□□□ 0.82
NPAS1Q99742 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS1Q99742 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
NPAS1Q99742 MIR3181-201ENST00000578512 73 ntBASIC20.16■□□□□ 0.82
NPAS1Q99742 AC110285.6-201ENST00000617652 491 ntBASIC20.16■□□□□ 0.82
NPAS1Q99742 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.16■□□□□ 0.82
NPAS1Q99742 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.16■□□□□ 0.82
NPAS1Q99742 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS1Q99742 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS1Q99742 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS1Q99742 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
NPAS1Q99742 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
NPAS1Q99742 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
NPAS1Q99742 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS1Q99742 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS1Q99742 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS1Q99742 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.15■□□□□ 0.82
NPAS1Q99742 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.15■□□□□ 0.82
NPAS1Q99742 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS1Q99742 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.82
NPAS1Q99742 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS1Q99742 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS1Q99742 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS1Q99742 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS1Q99742 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.14■□□□□ 0.81
NPAS1Q99742 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS1Q99742 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS1Q99742 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
NPAS1Q99742 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.14■□□□□ 0.81
NPAS1Q99742 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS1Q99742 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS1Q99742 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
NPAS1Q99742 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.13■□□□□ 0.81
NPAS1Q99742 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS1Q99742 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS1Q99742 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS1Q99742 SYT6-210ENST00000641643 1587 ntBASIC20.13■□□□□ 0.81
NPAS1Q99742 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
NPAS1Q99742 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
NPAS1Q99742 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS1Q99742 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.13■□□□□ 0.81
NPAS1Q99742 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.13■□□□□ 0.81
NPAS1Q99742 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.13■□□□□ 0.81
NPAS1Q99742 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.12■□□□□ 0.81
NPAS1Q99742 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
NPAS1Q99742 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPAS1Q99742 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPAS1Q99742 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPAS1Q99742 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPAS1Q99742 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.12■□□□□ 0.81
NPAS1Q99742 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPAS1Q99742 AL499627.2-201ENST00000606283 725 ntBASIC20.12■□□□□ 0.81
NPAS1Q99742 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.12■□□□□ 0.81
NPAS1Q99742 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.12■□□□□ 0.81
NPAS1Q99742 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.12■□□□□ 0.81
NPAS1Q99742 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPAS1Q99742 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.12■□□□□ 0.81
NPAS1Q99742 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPAS1Q99742 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.11■□□□□ 0.81
NPAS1Q99742 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.11■□□□□ 0.81
NPAS1Q99742 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.11■□□□□ 0.81
NPAS1Q99742 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
NPAS1Q99742 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NPAS1Q99742 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.11■□□□□ 0.81
NPAS1Q99742 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.11■□□□□ 0.81
NPAS1Q99742 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPAS1Q99742 AC024257.2-201ENST00000549699 147 ntBASIC20.11■□□□□ 0.81
NPAS1Q99742 AL136162.1-201ENST00000607711 1078 ntBASIC20.11■□□□□ 0.81
NPAS1Q99742 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
NPAS1Q99742 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.11■□□□□ 0.81
NPAS1Q99742 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NPAS1Q99742 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NPAS1Q99742 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPAS1Q99742 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPAS1Q99742 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPAS1Q99742 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPAS1Q99742 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.1■□□□□ 0.81
NPAS1Q99742 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NPAS1Q99742 AC004687.1-201ENST00000579003 1625 ntBASIC20.1■□□□□ 0.81
NPAS1Q99742 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPAS1Q99742 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms