Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF2Q99496 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF2Q99496 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RNF2Q99496 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF2Q99496 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF2Q99496 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF2Q99496 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF2Q99496 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF2Q99496 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF2Q99496 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF2Q99496 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF2Q99496 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF2Q99496 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF2Q99496 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF2Q99496 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF2Q99496 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF2Q99496 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF2Q99496 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.52■□□□□ 0.4
RNF2Q99496 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF2Q99496 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF2Q99496 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF2Q99496 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF2Q99496 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF2Q99496 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF2Q99496 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF2Q99496 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF2Q99496 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF2Q99496 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF2Q99496 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF2Q99496 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF2Q99496 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF2Q99496 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF2Q99496 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF2Q99496 AL121603.2-201ENST00000557373 2117 ntBASIC17.51■□□□□ 0.39
RNF2Q99496 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF2Q99496 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF2Q99496 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF2Q99496 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF2Q99496 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF2Q99496 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF2Q99496 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF2Q99496 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RNF2Q99496 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RNF2Q99496 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF2Q99496 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF2Q99496 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RNF2Q99496 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF2Q99496 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF2Q99496 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF2Q99496 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RNF2Q99496 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RNF2Q99496 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RNF2Q99496 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF2Q99496 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF2Q99496 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF2Q99496 AF131216.4-201ENST00000638924 1588 ntBASIC17.49■□□□□ 0.39
RNF2Q99496 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF2Q99496 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF2Q99496 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.49■□□□□ 0.39
RNF2Q99496 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF2Q99496 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF2Q99496 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF2Q99496 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF2Q99496 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF2Q99496 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF2Q99496 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
RNF2Q99496 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF2Q99496 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF2Q99496 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF2Q99496 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF2Q99496 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF2Q99496 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RNF2Q99496 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF2Q99496 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF2Q99496 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RNF2Q99496 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF2Q99496 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF2Q99496 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF2Q99496 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF2Q99496 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF2Q99496 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
RNF2Q99496 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RNF2Q99496 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.48■□□□□ 0.39
RNF2Q99496 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.48■□□□□ 0.39
RNF2Q99496 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF2Q99496 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF2Q99496 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF2Q99496 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF2Q99496 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF2Q99496 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF2Q99496 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RNF2Q99496 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF2Q99496 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF2Q99496 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
RNF2Q99496 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF2Q99496 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF2Q99496 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF2Q99496 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF2Q99496 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF2Q99496 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms