Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
RAB40CQ96S21 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40CQ96S21 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB40CQ96S21 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40CQ96S21 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40CQ96S21 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.93■□□□□ 0.46
RAB40CQ96S21 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40CQ96S21 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
RAB40CQ96S21 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
RAB40CQ96S21 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RAB40CQ96S21 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40CQ96S21 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RAB40CQ96S21 AC080038.3-201ENST00000623346 1952 ntBASIC17.93■□□□□ 0.46
RAB40CQ96S21 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB40CQ96S21 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40CQ96S21 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40CQ96S21 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40CQ96S21 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40CQ96S21 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40CQ96S21 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB40CQ96S21 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40CQ96S21 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB40CQ96S21 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40CQ96S21 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RAB40CQ96S21 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40CQ96S21 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB40CQ96S21 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
RAB40CQ96S21 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
RAB40CQ96S21 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40CQ96S21 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.91■□□□□ 0.46
RAB40CQ96S21 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40CQ96S21 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB40CQ96S21 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB40CQ96S21 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40CQ96S21 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB40CQ96S21 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40CQ96S21 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40CQ96S21 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40CQ96S21 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40CQ96S21 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB40CQ96S21 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40CQ96S21 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40CQ96S21 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40CQ96S21 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40CQ96S21 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RAB40CQ96S21 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40CQ96S21 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40CQ96S21 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB40CQ96S21 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
RAB40CQ96S21 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
RAB40CQ96S21 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
RAB40CQ96S21 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB40CQ96S21 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB40CQ96S21 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RAB40CQ96S21 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.89■□□□□ 0.45
RAB40CQ96S21 MIR6765-201ENST00000614092 87 ntBASIC17.89■□□□□ 0.45
RAB40CQ96S21 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB40CQ96S21 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.89■□□□□ 0.45
RAB40CQ96S21 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.89■□□□□ 0.45
RAB40CQ96S21 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RAB40CQ96S21 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB40CQ96S21 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40CQ96S21 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40CQ96S21 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40CQ96S21 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40CQ96S21 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40CQ96S21 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40CQ96S21 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.88■□□□□ 0.45
RAB40CQ96S21 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB40CQ96S21 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB40CQ96S21 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB40CQ96S21 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB40CQ96S21 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40CQ96S21 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.88■□□□□ 0.45
RAB40CQ96S21 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40CQ96S21 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RAB40CQ96S21 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB40CQ96S21 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RAB40CQ96S21 AC087742.1-201ENST00000575880 1738 ntBASIC17.87■□□□□ 0.45
RAB40CQ96S21 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.87■□□□□ 0.45
RAB40CQ96S21 LONRF2P2-201ENST00000439212 571 ntBASIC17.87■□□□□ 0.45
RAB40CQ96S21 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
RAB40CQ96S21 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB40CQ96S21 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.87■□□□□ 0.45
RAB40CQ96S21 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.87■□□□□ 0.45
RAB40CQ96S21 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB40CQ96S21 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.87■□□□□ 0.45
RAB40CQ96S21 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB40CQ96S21 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RAB40CQ96S21 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RAB40CQ96S21 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB40CQ96S21 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB40CQ96S21 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAB40CQ96S21 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.86■□□□□ 0.45
RAB40CQ96S21 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.86■□□□□ 0.45
RAB40CQ96S21 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB40CQ96S21 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
RAB40CQ96S21 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.86■□□□□ 0.45
RAB40CQ96S21 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.86■□□□□ 0.45
RAB40CQ96S21 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms