Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NR1H4Q96RI1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NR1H4Q96RI1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.84■□□□□ 0.93
NR1H4Q96RI1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.84■□□□□ 0.93
NR1H4Q96RI1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.84■□□□□ 0.93
NR1H4Q96RI1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.84■□□□□ 0.93
NR1H4Q96RI1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NR1H4Q96RI1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.84■□□□□ 0.93
NR1H4Q96RI1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.84■□□□□ 0.93
NR1H4Q96RI1 AL391422.3-201ENST00000603791 2761 ntBASIC20.84■□□□□ 0.93
NR1H4Q96RI1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NR1H4Q96RI1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.83■□□□□ 0.93
NR1H4Q96RI1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.83■□□□□ 0.93
NR1H4Q96RI1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NR1H4Q96RI1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
NR1H4Q96RI1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NR1H4Q96RI1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NR1H4Q96RI1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NR1H4Q96RI1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NR1H4Q96RI1 AC010542.4-201ENST00000563151 1910 ntBASIC20.83■□□□□ 0.93
NR1H4Q96RI1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.83■□□□□ 0.93
NR1H4Q96RI1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NR1H4Q96RI1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
NR1H4Q96RI1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.83■□□□□ 0.92
NR1H4Q96RI1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H4Q96RI1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H4Q96RI1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H4Q96RI1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H4Q96RI1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H4Q96RI1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.82■□□□□ 0.92
NR1H4Q96RI1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H4Q96RI1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NR1H4Q96RI1 ZNRF2P2-203ENST00000454624 420 ntBASIC20.82■□□□□ 0.92
NR1H4Q96RI1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.82■□□□□ 0.92
NR1H4Q96RI1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H4Q96RI1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H4Q96RI1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NR1H4Q96RI1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR1H4Q96RI1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NR1H4Q96RI1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NR1H4Q96RI1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NR1H4Q96RI1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NR1H4Q96RI1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
NR1H4Q96RI1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NR1H4Q96RI1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.8■□□□□ 0.92
NR1H4Q96RI1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NR1H4Q96RI1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NR1H4Q96RI1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NR1H4Q96RI1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NR1H4Q96RI1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H4Q96RI1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H4Q96RI1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
NR1H4Q96RI1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H4Q96RI1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NR1H4Q96RI1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H4Q96RI1 AC008813.1-201ENST00000536597 885 ntBASIC20.79■□□□□ 0.92
NR1H4Q96RI1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H4Q96RI1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H4Q96RI1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H4Q96RI1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H4Q96RI1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H4Q96RI1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NR1H4Q96RI1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
NR1H4Q96RI1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NR1H4Q96RI1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NR1H4Q96RI1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NR1H4Q96RI1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NR1H4Q96RI1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
NR1H4Q96RI1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.78■□□□□ 0.92
NR1H4Q96RI1 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.78■□□□□ 0.92
NR1H4Q96RI1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NR1H4Q96RI1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NR1H4Q96RI1 MIR219A2-201ENST00000608502 1504 ntBASIC20.78■□□□□ 0.92
NR1H4Q96RI1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NR1H4Q96RI1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NR1H4Q96RI1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NR1H4Q96RI1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NR1H4Q96RI1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.77■□□□□ 0.92
NR1H4Q96RI1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NR1H4Q96RI1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NR1H4Q96RI1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
NR1H4Q96RI1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms