Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPG11Q96JI7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.95■□□□□ 0.62
SPG11Q96JI7 AC073210.2-201ENST00000430369 194 ntBASIC18.95■□□□□ 0.62
SPG11Q96JI7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPG11Q96JI7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.95■□□□□ 0.62
SPG11Q96JI7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SPG11Q96JI7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.94■□□□□ 0.62
SPG11Q96JI7 OR2I1P-207ENST00000453522 948 ntBASIC18.94■□□□□ 0.62
SPG11Q96JI7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SPG11Q96JI7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPG11Q96JI7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPG11Q96JI7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPG11Q96JI7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPG11Q96JI7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPG11Q96JI7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPG11Q96JI7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPG11Q96JI7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.94■□□□□ 0.62
SPG11Q96JI7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SPG11Q96JI7 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.94■□□□□ 0.62
SPG11Q96JI7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SPG11Q96JI7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.93■□□□□ 0.62
SPG11Q96JI7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SPG11Q96JI7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.93■□□□□ 0.62
SPG11Q96JI7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.93■□□□□ 0.62
SPG11Q96JI7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.93■□□□□ 0.62
SPG11Q96JI7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPG11Q96JI7 AL121749.1-202ENST00000609313 2153 ntBASIC18.93■□□□□ 0.62
SPG11Q96JI7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPG11Q96JI7 BX005040.4-201ENST00000637145 1518 ntBASIC18.93■□□□□ 0.62
SPG11Q96JI7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPG11Q96JI7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SPG11Q96JI7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.93■□□□□ 0.62
SPG11Q96JI7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.92■□□□□ 0.62
SPG11Q96JI7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SPG11Q96JI7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.92■□□□□ 0.62
SPG11Q96JI7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SPG11Q96JI7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.92■□□□□ 0.62
SPG11Q96JI7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPG11Q96JI7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SPG11Q96JI7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SPG11Q96JI7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.92■□□□□ 0.62
SPG11Q96JI7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.92■□□□□ 0.62
SPG11Q96JI7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.92■□□□□ 0.62
SPG11Q96JI7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SPG11Q96JI7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SPG11Q96JI7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPG11Q96JI7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPG11Q96JI7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPG11Q96JI7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPG11Q96JI7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPG11Q96JI7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.91■□□□□ 0.62
SPG11Q96JI7 AC105233.4-201ENST00000642045 216 ntBASIC18.91■□□□□ 0.62
SPG11Q96JI7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SPG11Q96JI7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.91■□□□□ 0.62
SPG11Q96JI7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPG11Q96JI7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SPG11Q96JI7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.91■□□□□ 0.62
SPG11Q96JI7 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.91■□□□□ 0.62
SPG11Q96JI7 FP325331.1-202ENST00000623531 1380 ntBASIC18.91■□□□□ 0.62
SPG11Q96JI7 AL161729.1-201ENST00000604104 1402 ntBASIC18.91■□□□□ 0.62
SPG11Q96JI7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.91■□□□□ 0.62
SPG11Q96JI7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPG11Q96JI7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.9■□□□□ 0.62
SPG11Q96JI7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SPG11Q96JI7 HLA-L-211ENST00000482052 1765 ntBASIC18.9■□□□□ 0.62
SPG11Q96JI7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPG11Q96JI7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPG11Q96JI7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.9■□□□□ 0.62
SPG11Q96JI7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPG11Q96JI7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.9■□□□□ 0.62
SPG11Q96JI7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.9■□□□□ 0.62
SPG11Q96JI7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.9■□□□□ 0.62
SPG11Q96JI7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.9■□□□□ 0.62
SPG11Q96JI7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.9■□□□□ 0.62
SPG11Q96JI7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPG11Q96JI7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.9■□□□□ 0.62
SPG11Q96JI7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
SPG11Q96JI7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPG11Q96JI7 DUX4L4-201ENST00000566884 1269 ntBASIC18.9■□□□□ 0.62
SPG11Q96JI7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.9■□□□□ 0.62
SPG11Q96JI7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPG11Q96JI7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPG11Q96JI7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPG11Q96JI7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
SPG11Q96JI7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPG11Q96JI7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPG11Q96JI7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPG11Q96JI7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPG11Q96JI7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.89■□□□□ 0.61
SPG11Q96JI7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.89■□□□□ 0.61
SPG11Q96JI7 AC083906.2-201ENST00000511578 360 ntBASIC18.89■□□□□ 0.61
SPG11Q96JI7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPG11Q96JI7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.89■□□□□ 0.61
SPG11Q96JI7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.89■□□□□ 0.61
SPG11Q96JI7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPG11Q96JI7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPG11Q96JI7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPG11Q96JI7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.88■□□□□ 0.61
SPG11Q96JI7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPG11Q96JI7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms