Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TIMD4Q96H15 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.6■□□□□ 0.57
TIMD4Q96H15 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TIMD4Q96H15 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TIMD4Q96H15 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIMD4Q96H15 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIMD4Q96H15 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TIMD4Q96H15 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.6■□□□□ 0.57
TIMD4Q96H15 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIMD4Q96H15 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIMD4Q96H15 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIMD4Q96H15 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TIMD4Q96H15 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TIMD4Q96H15 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIMD4Q96H15 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.6■□□□□ 0.57
TIMD4Q96H15 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TIMD4Q96H15 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TIMD4Q96H15 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TIMD4Q96H15 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TIMD4Q96H15 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.59■□□□□ 0.57
TIMD4Q96H15 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.59■□□□□ 0.57
TIMD4Q96H15 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TIMD4Q96H15 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TIMD4Q96H15 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TIMD4Q96H15 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TIMD4Q96H15 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TIMD4Q96H15 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TIMD4Q96H15 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.58■□□□□ 0.57
TIMD4Q96H15 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TIMD4Q96H15 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TIMD4Q96H15 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.58■□□□□ 0.57
TIMD4Q96H15 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
TIMD4Q96H15 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TIMD4Q96H15 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TIMD4Q96H15 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TIMD4Q96H15 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TIMD4Q96H15 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.58■□□□□ 0.56
TIMD4Q96H15 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TIMD4Q96H15 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.58■□□□□ 0.56
TIMD4Q96H15 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TIMD4Q96H15 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TIMD4Q96H15 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TIMD4Q96H15 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TIMD4Q96H15 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TIMD4Q96H15 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TIMD4Q96H15 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TIMD4Q96H15 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TIMD4Q96H15 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.57■□□□□ 0.56
TIMD4Q96H15 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.57■□□□□ 0.56
TIMD4Q96H15 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TIMD4Q96H15 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.57■□□□□ 0.56
TIMD4Q96H15 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TIMD4Q96H15 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TIMD4Q96H15 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TIMD4Q96H15 TSPY26P-201ENST00000476365 1326 ntBASIC18.56■□□□□ 0.56
TIMD4Q96H15 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TIMD4Q96H15 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TIMD4Q96H15 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.56■□□□□ 0.56
TIMD4Q96H15 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.56■□□□□ 0.56
TIMD4Q96H15 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.56■□□□□ 0.56
TIMD4Q96H15 AL353803.4-201ENST00000565882 1934 ntBASIC18.56■□□□□ 0.56
TIMD4Q96H15 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TIMD4Q96H15 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
TIMD4Q96H15 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.56■□□□□ 0.56
TIMD4Q96H15 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TIMD4Q96H15 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TIMD4Q96H15 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TIMD4Q96H15 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TIMD4Q96H15 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TIMD4Q96H15 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TIMD4Q96H15 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TIMD4Q96H15 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.55■□□□□ 0.56
TIMD4Q96H15 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TIMD4Q96H15 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TIMD4Q96H15 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TIMD4Q96H15 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.55■□□□□ 0.56
TIMD4Q96H15 IGHV3-19-201ENST00000521488 291 ntBASIC18.55■□□□□ 0.56
TIMD4Q96H15 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.55■□□□□ 0.56
TIMD4Q96H15 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.55■□□□□ 0.56
TIMD4Q96H15 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TIMD4Q96H15 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TIMD4Q96H15 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.55■□□□□ 0.56
TIMD4Q96H15 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TIMD4Q96H15 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TIMD4Q96H15 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
TIMD4Q96H15 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TIMD4Q96H15 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.54■□□□□ 0.56
TIMD4Q96H15 RARRES2P6-201ENST00000567333 442 ntBASIC18.54■□□□□ 0.56
TIMD4Q96H15 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.54■□□□□ 0.56
TIMD4Q96H15 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.54■□□□□ 0.56
TIMD4Q96H15 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.54■□□□□ 0.56
TIMD4Q96H15 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TIMD4Q96H15 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
TIMD4Q96H15 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TIMD4Q96H15 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TIMD4Q96H15 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TIMD4Q96H15 AP005435.1-201ENST00000529293 1178 ntBASIC18.53■□□□□ 0.56
TIMD4Q96H15 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TIMD4Q96H15 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TIMD4Q96H15 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms