Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTHRC1Q96CG8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.63■□□□□ 0.89
CTHRC1Q96CG8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.63■□□□□ 0.89
CTHRC1Q96CG8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTHRC1Q96CG8 C1orf229-201ENST00000623686 2258 ntBASIC20.63■□□□□ 0.89
CTHRC1Q96CG8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.63■□□□□ 0.89
CTHRC1Q96CG8 AC004687.1-201ENST00000579003 1625 ntBASIC20.63■□□□□ 0.89
CTHRC1Q96CG8 SYT6-210ENST00000641643 1587 ntBASIC20.63■□□□□ 0.89
CTHRC1Q96CG8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CTHRC1Q96CG8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.62■□□□□ 0.89
CTHRC1Q96CG8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTHRC1Q96CG8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.62■□□□□ 0.89
CTHRC1Q96CG8 SERBP1P1-201ENST00000396021 1160 ntBASIC20.62■□□□□ 0.89
CTHRC1Q96CG8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.62■□□□□ 0.89
CTHRC1Q96CG8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTHRC1Q96CG8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTHRC1Q96CG8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CTHRC1Q96CG8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CTHRC1Q96CG8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTHRC1Q96CG8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CTHRC1Q96CG8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CTHRC1Q96CG8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTHRC1Q96CG8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTHRC1Q96CG8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTHRC1Q96CG8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
CTHRC1Q96CG8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTHRC1Q96CG8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTHRC1Q96CG8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTHRC1Q96CG8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTHRC1Q96CG8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTHRC1Q96CG8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CTHRC1Q96CG8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTHRC1Q96CG8 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.61■□□□□ 0.89
CTHRC1Q96CG8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.61■□□□□ 0.89
CTHRC1Q96CG8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTHRC1Q96CG8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTHRC1Q96CG8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTHRC1Q96CG8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CTHRC1Q96CG8 AC133561.1-201ENST00000568600 2415 ntBASIC20.61■□□□□ 0.89
CTHRC1Q96CG8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CTHRC1Q96CG8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CTHRC1Q96CG8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
CTHRC1Q96CG8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTHRC1Q96CG8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTHRC1Q96CG8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTHRC1Q96CG8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTHRC1Q96CG8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTHRC1Q96CG8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.6■□□□□ 0.89
CTHRC1Q96CG8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.6■□□□□ 0.89
CTHRC1Q96CG8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTHRC1Q96CG8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.6■□□□□ 0.89
CTHRC1Q96CG8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTHRC1Q96CG8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.6■□□□□ 0.89
CTHRC1Q96CG8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
CTHRC1Q96CG8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTHRC1Q96CG8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTHRC1Q96CG8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTHRC1Q96CG8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CTHRC1Q96CG8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.59■□□□□ 0.89
CTHRC1Q96CG8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.59■□□□□ 0.89
CTHRC1Q96CG8 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.59■□□□□ 0.89
CTHRC1Q96CG8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.59■□□□□ 0.89
CTHRC1Q96CG8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTHRC1Q96CG8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.59■□□□□ 0.89
CTHRC1Q96CG8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CTHRC1Q96CG8 AC011298.3-201ENST00000615796 283 ntBASIC20.59■□□□□ 0.89
CTHRC1Q96CG8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.59■□□□□ 0.89
CTHRC1Q96CG8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CTHRC1Q96CG8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTHRC1Q96CG8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.58■□□□□ 0.89
CTHRC1Q96CG8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.58■□□□□ 0.89
CTHRC1Q96CG8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
CTHRC1Q96CG8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTHRC1Q96CG8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.58■□□□□ 0.89
CTHRC1Q96CG8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CTHRC1Q96CG8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.58■□□□□ 0.88
CTHRC1Q96CG8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CTHRC1Q96CG8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTHRC1Q96CG8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTHRC1Q96CG8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTHRC1Q96CG8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTHRC1Q96CG8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.57■□□□□ 0.88
CTHRC1Q96CG8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.57■□□□□ 0.88
CTHRC1Q96CG8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.57■□□□□ 0.88
CTHRC1Q96CG8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTHRC1Q96CG8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.57■□□□□ 0.88
CTHRC1Q96CG8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CTHRC1Q96CG8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTHRC1Q96CG8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.56■□□□□ 0.88
CTHRC1Q96CG8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CTHRC1Q96CG8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTHRC1Q96CG8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTHRC1Q96CG8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTHRC1Q96CG8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTHRC1Q96CG8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTHRC1Q96CG8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTHRC1Q96CG8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTHRC1Q96CG8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.55■□□□□ 0.88
CTHRC1Q96CG8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTHRC1Q96CG8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms