Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 AC245100.8-202ENST00000629247 1058 ntBASIC23.71■■□□□ 1.39
SHC3Q92529 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SHC3Q92529 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHC3Q92529 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
SHC3Q92529 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SHC3Q92529 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
SHC3Q92529 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.7■■□□□ 1.38
SHC3Q92529 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.7■■□□□ 1.38
SHC3Q92529 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.38
SHC3Q92529 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.7■■□□□ 1.38
SHC3Q92529 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SHC3Q92529 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.7■■□□□ 1.38
SHC3Q92529 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.7■■□□□ 1.38
SHC3Q92529 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.7■■□□□ 1.38
SHC3Q92529 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SHC3Q92529 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.7■■□□□ 1.38
SHC3Q92529 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHC3Q92529 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHC3Q92529 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
SHC3Q92529 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
SHC3Q92529 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHC3Q92529 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.69■■□□□ 1.38
SHC3Q92529 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHC3Q92529 AC087742.1-201ENST00000575880 1738 ntBASIC23.69■■□□□ 1.38
SHC3Q92529 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHC3Q92529 GUSBP5-202ENST00000510805 1989 ntBASIC23.69■■□□□ 1.38
SHC3Q92529 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHC3Q92529 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHC3Q92529 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHC3Q92529 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.68■■□□□ 1.38
SHC3Q92529 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHC3Q92529 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHC3Q92529 AC127496.7-201ENST00000625110 1798 ntBASIC23.68■■□□□ 1.38
SHC3Q92529 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHC3Q92529 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHC3Q92529 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.68■■□□□ 1.38
SHC3Q92529 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.68■■□□□ 1.38
SHC3Q92529 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHC3Q92529 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHC3Q92529 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.68■■□□□ 1.38
SHC3Q92529 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.67■■□□□ 1.38
SHC3Q92529 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHC3Q92529 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHC3Q92529 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SHC3Q92529 AC004687.1-201ENST00000579003 1625 ntBASIC23.67■■□□□ 1.38
SHC3Q92529 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHC3Q92529 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
SHC3Q92529 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
SHC3Q92529 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SHC3Q92529 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
SHC3Q92529 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHC3Q92529 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHC3Q92529 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHC3Q92529 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHC3Q92529 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHC3Q92529 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SHC3Q92529 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.66■■□□□ 1.38
SHC3Q92529 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SHC3Q92529 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SHC3Q92529 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SHC3Q92529 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHC3Q92529 AC006455.2-201ENST00000429931 906 ntBASIC23.66■■□□□ 1.38
SHC3Q92529 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SHC3Q92529 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SHC3Q92529 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SHC3Q92529 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHC3Q92529 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.66■■□□□ 1.38
SHC3Q92529 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SHC3Q92529 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHC3Q92529 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.66■■□□□ 1.38
SHC3Q92529 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SHC3Q92529 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SHC3Q92529 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
SHC3Q92529 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SHC3Q92529 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SHC3Q92529 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.65■■□□□ 1.38
SHC3Q92529 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SHC3Q92529 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SHC3Q92529 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
SHC3Q92529 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SHC3Q92529 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SHC3Q92529 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SHC3Q92529 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SHC3Q92529 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SHC3Q92529 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SHC3Q92529 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.64■■□□□ 1.37
SHC3Q92529 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SHC3Q92529 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SHC3Q92529 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.64■■□□□ 1.37
SHC3Q92529 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.64■■□□□ 1.37
SHC3Q92529 AC099791.2-201ENST00000605725 427 ntBASIC23.64■■□□□ 1.37
SHC3Q92529 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.64■■□□□ 1.37
SHC3Q92529 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
SHC3Q92529 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.64■■□□□ 1.37
SHC3Q92529 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SHC3Q92529 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SHC3Q92529 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SHC3Q92529 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.64■■□□□ 1.37
SHC3Q92529 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.63■■□□□ 1.37
SHC3Q92529 AC079834.2-201ENST00000609776 1949 ntBASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms