Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.52■■□□□ 1.36
RFFLQ8WZ73 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.52■■□□□ 1.36
RFFLQ8WZ73 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RFFLQ8WZ73 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.52■■□□□ 1.35
RFFLQ8WZ73 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFFLQ8WZ73 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFFLQ8WZ73 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RFFLQ8WZ73 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFFLQ8WZ73 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
RFFLQ8WZ73 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
RFFLQ8WZ73 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.51■■□□□ 1.35
RFFLQ8WZ73 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RFFLQ8WZ73 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RFFLQ8WZ73 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.51■■□□□ 1.35
RFFLQ8WZ73 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.51■■□□□ 1.35
RFFLQ8WZ73 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RFFLQ8WZ73 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFFLQ8WZ73 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFFLQ8WZ73 AC139530.1-201ENST00000575312 1977 ntBASIC23.51■■□□□ 1.35
RFFLQ8WZ73 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.5■■□□□ 1.35
RFFLQ8WZ73 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFFLQ8WZ73 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.5■■□□□ 1.35
RFFLQ8WZ73 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFFLQ8WZ73 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RFFLQ8WZ73 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.5■■□□□ 1.35
RFFLQ8WZ73 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFFLQ8WZ73 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.5■■□□□ 1.35
RFFLQ8WZ73 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
RFFLQ8WZ73 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.5■■□□□ 1.35
RFFLQ8WZ73 AC087742.1-201ENST00000575880 1738 ntBASIC23.5■■□□□ 1.35
RFFLQ8WZ73 LINC01529-204ENST00000636474 1715 ntBASIC23.5■■□□□ 1.35
RFFLQ8WZ73 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFFLQ8WZ73 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFFLQ8WZ73 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
RFFLQ8WZ73 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RFFLQ8WZ73 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RFFLQ8WZ73 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
RFFLQ8WZ73 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.49■■□□□ 1.35
RFFLQ8WZ73 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.49■■□□□ 1.35
RFFLQ8WZ73 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RFFLQ8WZ73 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.49■■□□□ 1.35
RFFLQ8WZ73 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
RFFLQ8WZ73 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.49■■□□□ 1.35
RFFLQ8WZ73 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RFFLQ8WZ73 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.48■■□□□ 1.35
RFFLQ8WZ73 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RFFLQ8WZ73 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RFFLQ8WZ73 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RFFLQ8WZ73 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
RFFLQ8WZ73 BX664725.1-201ENST00000438252 379 ntBASIC23.48■■□□□ 1.35
RFFLQ8WZ73 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RFFLQ8WZ73 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RFFLQ8WZ73 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
RFFLQ8WZ73 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.48■■□□□ 1.35
RFFLQ8WZ73 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RFFLQ8WZ73 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RFFLQ8WZ73 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
RFFLQ8WZ73 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
RFFLQ8WZ73 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.47■■□□□ 1.35
RFFLQ8WZ73 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.47■■□□□ 1.35
RFFLQ8WZ73 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.47■■□□□ 1.35
RFFLQ8WZ73 FP325331.1-202ENST00000623531 1380 ntBASIC23.47■■□□□ 1.35
RFFLQ8WZ73 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RFFLQ8WZ73 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RFFLQ8WZ73 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.47■■□□□ 1.35
RFFLQ8WZ73 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
RFFLQ8WZ73 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RFFLQ8WZ73 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.46■■□□□ 1.35
RFFLQ8WZ73 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RFFLQ8WZ73 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RFFLQ8WZ73 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RFFLQ8WZ73 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RFFLQ8WZ73 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RFFLQ8WZ73 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RFFLQ8WZ73 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.46■■□□□ 1.35
RFFLQ8WZ73 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.46■■□□□ 1.35
RFFLQ8WZ73 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.46■■□□□ 1.35
RFFLQ8WZ73 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RFFLQ8WZ73 AC137767.1-201ENST00000602918 1920 ntBASIC23.46■■□□□ 1.35
RFFLQ8WZ73 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
RFFLQ8WZ73 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
RFFLQ8WZ73 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RFFLQ8WZ73 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
RFFLQ8WZ73 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.45■■□□□ 1.35
RFFLQ8WZ73 AC080038.3-201ENST00000623346 1952 ntBASIC23.45■■□□□ 1.35
RFFLQ8WZ73 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RFFLQ8WZ73 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.45■■□□□ 1.34
RFFLQ8WZ73 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RFFLQ8WZ73 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RFFLQ8WZ73 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.45■■□□□ 1.34
RFFLQ8WZ73 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.45■■□□□ 1.34
RFFLQ8WZ73 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RFFLQ8WZ73 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RFFLQ8WZ73 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RFFLQ8WZ73 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RFFLQ8WZ73 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
RFFLQ8WZ73 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RFFLQ8WZ73 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RFFLQ8WZ73 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RFFLQ8WZ73 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms