Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHROOM3Q8TF72 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SHROOM3Q8TF72 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHROOM3Q8TF72 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.67■■□□□ 1.22
SHROOM3Q8TF72 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SHROOM3Q8TF72 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SHROOM3Q8TF72 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.67■■□□□ 1.22
SHROOM3Q8TF72 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SHROOM3Q8TF72 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.67■■□□□ 1.22
SHROOM3Q8TF72 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SHROOM3Q8TF72 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.67■■□□□ 1.22
SHROOM3Q8TF72 LINC01529-204ENST00000636474 1715 ntBASIC22.67■■□□□ 1.22
SHROOM3Q8TF72 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.66■■□□□ 1.22
SHROOM3Q8TF72 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
SHROOM3Q8TF72 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SHROOM3Q8TF72 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.66■■□□□ 1.22
SHROOM3Q8TF72 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
SHROOM3Q8TF72 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHROOM3Q8TF72 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHROOM3Q8TF72 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SHROOM3Q8TF72 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.66■■□□□ 1.22
SHROOM3Q8TF72 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.65■■□□□ 1.22
SHROOM3Q8TF72 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.65■■□□□ 1.22
SHROOM3Q8TF72 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.65■■□□□ 1.22
SHROOM3Q8TF72 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
SHROOM3Q8TF72 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SHROOM3Q8TF72 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SHROOM3Q8TF72 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SHROOM3Q8TF72 SUDS3P1-201ENST00000505831 966 ntBASIC22.65■■□□□ 1.22
SHROOM3Q8TF72 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
SHROOM3Q8TF72 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SHROOM3Q8TF72 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SHROOM3Q8TF72 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
SHROOM3Q8TF72 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SHROOM3Q8TF72 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SHROOM3Q8TF72 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.64■■□□□ 1.21
SHROOM3Q8TF72 AC009086.3-201ENST00000623486 1008 ntBASIC22.64■■□□□ 1.21
SHROOM3Q8TF72 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SHROOM3Q8TF72 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.64■■□□□ 1.21
SHROOM3Q8TF72 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SHROOM3Q8TF72 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
SHROOM3Q8TF72 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.63■■□□□ 1.21
SHROOM3Q8TF72 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SHROOM3Q8TF72 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SHROOM3Q8TF72 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SHROOM3Q8TF72 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.63■■□□□ 1.21
SHROOM3Q8TF72 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SHROOM3Q8TF72 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SHROOM3Q8TF72 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SHROOM3Q8TF72 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.63■■□□□ 1.21
SHROOM3Q8TF72 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.63■■□□□ 1.21
SHROOM3Q8TF72 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SHROOM3Q8TF72 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
SHROOM3Q8TF72 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHROOM3Q8TF72 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
SHROOM3Q8TF72 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.62■■□□□ 1.21
SHROOM3Q8TF72 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.62■■□□□ 1.21
SHROOM3Q8TF72 AC233723.2-201ENST00000623798 2106 ntBASIC22.62■■□□□ 1.21
SHROOM3Q8TF72 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHROOM3Q8TF72 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHROOM3Q8TF72 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHROOM3Q8TF72 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHROOM3Q8TF72 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHROOM3Q8TF72 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHROOM3Q8TF72 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHROOM3Q8TF72 SLC47A1P1-202ENST00000449666 945 ntBASIC22.61■■□□□ 1.21
SHROOM3Q8TF72 AC133561.4-201ENST00000566112 224 ntBASIC22.61■■□□□ 1.21
SHROOM3Q8TF72 DUX4L4-201ENST00000566884 1269 ntBASIC22.61■■□□□ 1.21
SHROOM3Q8TF72 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.61■■□□□ 1.21
SHROOM3Q8TF72 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHROOM3Q8TF72 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.61■■□□□ 1.21
SHROOM3Q8TF72 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHROOM3Q8TF72 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.61■■□□□ 1.21
SHROOM3Q8TF72 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.61■■□□□ 1.21
SHROOM3Q8TF72 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHROOM3Q8TF72 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.61■■□□□ 1.21
SHROOM3Q8TF72 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
SHROOM3Q8TF72 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM3Q8TF72 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
SHROOM3Q8TF72 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM3Q8TF72 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM3Q8TF72 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM3Q8TF72 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM3Q8TF72 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM3Q8TF72 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM3Q8TF72 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM3Q8TF72 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHROOM3Q8TF72 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHROOM3Q8TF72 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.59■■□□□ 1.21
SHROOM3Q8TF72 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHROOM3Q8TF72 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.59■■□□□ 1.21
SHROOM3Q8TF72 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHROOM3Q8TF72 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHROOM3Q8TF72 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SHROOM3Q8TF72 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.59■■□□□ 1.21
SHROOM3Q8TF72 DUX4L19-201ENST00000557448 1267 ntBASIC22.59■■□□□ 1.21
SHROOM3Q8TF72 AC010525.1-201ENST00000585559 441 ntBASIC22.59■■□□□ 1.21
SHROOM3Q8TF72 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHROOM3Q8TF72 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHROOM3Q8TF72 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms