Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP61Q8NHU2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP61Q8NHU2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP61Q8NHU2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.27■■□□□ 1.16
CFAP61Q8NHU2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP61Q8NHU2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CFAP61Q8NHU2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CFAP61Q8NHU2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.27■■□□□ 1.16
CFAP61Q8NHU2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP61Q8NHU2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP61Q8NHU2 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.26■■□□□ 1.15
CFAP61Q8NHU2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.26■■□□□ 1.15
CFAP61Q8NHU2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.26■■□□□ 1.15
CFAP61Q8NHU2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.26■■□□□ 1.15
CFAP61Q8NHU2 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.26■■□□□ 1.15
CFAP61Q8NHU2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.26■■□□□ 1.15
CFAP61Q8NHU2 GUSBP5-202ENST00000510805 1989 ntBASIC22.26■■□□□ 1.15
CFAP61Q8NHU2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP61Q8NHU2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CFAP61Q8NHU2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CFAP61Q8NHU2 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.25■■□□□ 1.15
CFAP61Q8NHU2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CFAP61Q8NHU2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CFAP61Q8NHU2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CFAP61Q8NHU2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CFAP61Q8NHU2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CFAP61Q8NHU2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CFAP61Q8NHU2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
CFAP61Q8NHU2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CFAP61Q8NHU2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.25■■□□□ 1.15
CFAP61Q8NHU2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.25■■□□□ 1.15
CFAP61Q8NHU2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CFAP61Q8NHU2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CFAP61Q8NHU2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CFAP61Q8NHU2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CFAP61Q8NHU2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.24■■□□□ 1.15
CFAP61Q8NHU2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CFAP61Q8NHU2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.24■■□□□ 1.15
CFAP61Q8NHU2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.24■■□□□ 1.15
CFAP61Q8NHU2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.24■■□□□ 1.15
CFAP61Q8NHU2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CFAP61Q8NHU2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.24■■□□□ 1.15
CFAP61Q8NHU2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.24■■□□□ 1.15
CFAP61Q8NHU2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CFAP61Q8NHU2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CFAP61Q8NHU2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CFAP61Q8NHU2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CFAP61Q8NHU2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CFAP61Q8NHU2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CFAP61Q8NHU2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.23■■□□□ 1.15
CFAP61Q8NHU2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CFAP61Q8NHU2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.23■■□□□ 1.15
CFAP61Q8NHU2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CFAP61Q8NHU2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.23■■□□□ 1.15
CFAP61Q8NHU2 AC005703.6-201ENST00000623265 1329 ntBASIC22.23■■□□□ 1.15
CFAP61Q8NHU2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CFAP61Q8NHU2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CFAP61Q8NHU2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CFAP61Q8NHU2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CFAP61Q8NHU2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CFAP61Q8NHU2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.22■■□□□ 1.15
CFAP61Q8NHU2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CFAP61Q8NHU2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.22■■□□□ 1.15
CFAP61Q8NHU2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CFAP61Q8NHU2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CFAP61Q8NHU2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CFAP61Q8NHU2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CFAP61Q8NHU2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CFAP61Q8NHU2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.21■■□□□ 1.15
CFAP61Q8NHU2 AC007375.3-201ENST00000600936 2314 ntBASIC22.21■■□□□ 1.15
CFAP61Q8NHU2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CFAP61Q8NHU2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CFAP61Q8NHU2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CFAP61Q8NHU2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CFAP61Q8NHU2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CFAP61Q8NHU2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CFAP61Q8NHU2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
CFAP61Q8NHU2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CFAP61Q8NHU2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CFAP61Q8NHU2 AL356441.2-201ENST00000443009 864 ntBASIC22.2■■□□□ 1.14
CFAP61Q8NHU2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CFAP61Q8NHU2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CFAP61Q8NHU2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CFAP61Q8NHU2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CFAP61Q8NHU2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.2■■□□□ 1.14
CFAP61Q8NHU2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CFAP61Q8NHU2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CFAP61Q8NHU2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CFAP61Q8NHU2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CFAP61Q8NHU2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CFAP61Q8NHU2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.19■■□□□ 1.14
CFAP61Q8NHU2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CFAP61Q8NHU2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.19■■□□□ 1.14
CFAP61Q8NHU2 MIR6724-1-201ENST00000616420 92 ntBASIC22.19■■□□□ 1.14
CFAP61Q8NHU2 MIR6724-2-201ENST00000616483 92 ntBASIC22.19■■□□□ 1.14
CFAP61Q8NHU2 MIR6724-4-201ENST00000617390 92 ntBASIC22.19■■□□□ 1.14
CFAP61Q8NHU2 MIR6724-3-201ENST00000622482 92 ntBASIC22.19■■□□□ 1.14
CFAP61Q8NHU2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CFAP61Q8NHU2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.19■■□□□ 1.14
CFAP61Q8NHU2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms