Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.66■□□□□ 0.74
ZIC4Q8N9L1 AL136162.1-201ENST00000607711 1078 ntBASIC19.66■□□□□ 0.74
ZIC4Q8N9L1 AC011298.3-201ENST00000615796 283 ntBASIC19.66■□□□□ 0.74
ZIC4Q8N9L1 AC110285.6-201ENST00000617652 491 ntBASIC19.66■□□□□ 0.74
ZIC4Q8N9L1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.66■□□□□ 0.74
ZIC4Q8N9L1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZIC4Q8N9L1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZIC4Q8N9L1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZIC4Q8N9L1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.66■□□□□ 0.74
ZIC4Q8N9L1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZIC4Q8N9L1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 AC024257.2-201ENST00000549699 147 ntBASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZIC4Q8N9L1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
ZIC4Q8N9L1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.64■□□□□ 0.74
ZIC4Q8N9L1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZIC4Q8N9L1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
ZIC4Q8N9L1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ZIC4Q8N9L1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZIC4Q8N9L1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.64■□□□□ 0.73
ZIC4Q8N9L1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.64■□□□□ 0.73
ZIC4Q8N9L1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.64■□□□□ 0.73
ZIC4Q8N9L1 AC136469.2-201ENST00000623944 1028 ntBASIC19.64■□□□□ 0.73
ZIC4Q8N9L1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.64■□□□□ 0.73
ZIC4Q8N9L1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZIC4Q8N9L1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZIC4Q8N9L1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZIC4Q8N9L1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZIC4Q8N9L1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.64■□□□□ 0.73
ZIC4Q8N9L1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZIC4Q8N9L1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.64■□□□□ 0.73
ZIC4Q8N9L1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.63■□□□□ 0.73
ZIC4Q8N9L1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZIC4Q8N9L1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZIC4Q8N9L1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZIC4Q8N9L1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.63■□□□□ 0.73
ZIC4Q8N9L1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
ZIC4Q8N9L1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZIC4Q8N9L1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ZIC4Q8N9L1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
ZIC4Q8N9L1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZIC4Q8N9L1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZIC4Q8N9L1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZIC4Q8N9L1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ZIC4Q8N9L1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.62■□□□□ 0.73
ZIC4Q8N9L1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.62■□□□□ 0.73
ZIC4Q8N9L1 PBX2P1-201ENST00000493219 1291 ntBASIC19.62■□□□□ 0.73
ZIC4Q8N9L1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.62■□□□□ 0.73
ZIC4Q8N9L1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
ZIC4Q8N9L1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.62■□□□□ 0.73
ZIC4Q8N9L1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ZIC4Q8N9L1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZIC4Q8N9L1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 AC068473.5-201ENST00000616428 2072 ntBASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 AC135279.3-201ENST00000610945 1311 ntBASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 AC106739.1-201ENST00000617035 715 ntBASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.61■□□□□ 0.73
ZIC4Q8N9L1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ZIC4Q8N9L1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.6■□□□□ 0.73
ZIC4Q8N9L1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZIC4Q8N9L1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.6■□□□□ 0.73
ZIC4Q8N9L1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZIC4Q8N9L1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.6■□□□□ 0.73
ZIC4Q8N9L1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZIC4Q8N9L1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZIC4Q8N9L1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZIC4Q8N9L1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms