Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EXD3Q8N9H8 HLA-L-211ENST00000482052 1765 ntBASIC20.85■□□□□ 0.93
EXD3Q8N9H8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
EXD3Q8N9H8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.84■□□□□ 0.93
EXD3Q8N9H8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.84■□□□□ 0.93
EXD3Q8N9H8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.84■□□□□ 0.93
EXD3Q8N9H8 RAP2CP1-201ENST00000605103 478 ntBASIC20.84■□□□□ 0.93
EXD3Q8N9H8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
EXD3Q8N9H8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EXD3Q8N9H8 LINC02228-203ENST00000641970 1355 ntBASIC20.84■□□□□ 0.93
EXD3Q8N9H8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
EXD3Q8N9H8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
EXD3Q8N9H8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EXD3Q8N9H8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.83■□□□□ 0.93
EXD3Q8N9H8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.83■□□□□ 0.93
EXD3Q8N9H8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
EXD3Q8N9H8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
EXD3Q8N9H8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
EXD3Q8N9H8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXD3Q8N9H8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXD3Q8N9H8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.81■□□□□ 0.92
EXD3Q8N9H8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXD3Q8N9H8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EXD3Q8N9H8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EXD3Q8N9H8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXD3Q8N9H8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.81■□□□□ 0.92
EXD3Q8N9H8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EXD3Q8N9H8 CDCA4P2-201ENST00000441182 718 ntBASIC20.81■□□□□ 0.92
EXD3Q8N9H8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.81■□□□□ 0.92
EXD3Q8N9H8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXD3Q8N9H8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXD3Q8N9H8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXD3Q8N9H8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXD3Q8N9H8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXD3Q8N9H8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.81■□□□□ 0.92
EXD3Q8N9H8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXD3Q8N9H8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXD3Q8N9H8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXD3Q8N9H8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
EXD3Q8N9H8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXD3Q8N9H8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
EXD3Q8N9H8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EXD3Q8N9H8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.8■□□□□ 0.92
EXD3Q8N9H8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.8■□□□□ 0.92
EXD3Q8N9H8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.8■□□□□ 0.92
EXD3Q8N9H8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.8■□□□□ 0.92
EXD3Q8N9H8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.8■□□□□ 0.92
EXD3Q8N9H8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.8■□□□□ 0.92
EXD3Q8N9H8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXD3Q8N9H8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.8■□□□□ 0.92
EXD3Q8N9H8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXD3Q8N9H8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXD3Q8N9H8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.79■□□□□ 0.92
EXD3Q8N9H8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXD3Q8N9H8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXD3Q8N9H8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
EXD3Q8N9H8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
EXD3Q8N9H8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EXD3Q8N9H8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXD3Q8N9H8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXD3Q8N9H8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EXD3Q8N9H8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EXD3Q8N9H8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.79■□□□□ 0.92
EXD3Q8N9H8 TMEM191A-211ENST00000637163 1067 ntBASIC20.79■□□□□ 0.92
EXD3Q8N9H8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.79■□□□□ 0.92
EXD3Q8N9H8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.79■□□□□ 0.92
EXD3Q8N9H8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.79■□□□□ 0.92
EXD3Q8N9H8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EXD3Q8N9H8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EXD3Q8N9H8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms