Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.26■□□□□ 0.83
LSMEM1Q8N8F7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.26■□□□□ 0.83
LSMEM1Q8N8F7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LSMEM1Q8N8F7 MIR6724-1-201ENST00000616420 92 ntBASIC20.26■□□□□ 0.83
LSMEM1Q8N8F7 MIR6724-2-201ENST00000616483 92 ntBASIC20.26■□□□□ 0.83
LSMEM1Q8N8F7 MIR6724-4-201ENST00000617390 92 ntBASIC20.26■□□□□ 0.83
LSMEM1Q8N8F7 MIR6724-3-201ENST00000622482 92 ntBASIC20.26■□□□□ 0.83
LSMEM1Q8N8F7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSMEM1Q8N8F7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSMEM1Q8N8F7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSMEM1Q8N8F7 GUSBP5-202ENST00000510805 1989 ntBASIC20.26■□□□□ 0.83
LSMEM1Q8N8F7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LSMEM1Q8N8F7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LSMEM1Q8N8F7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 AL035685.1-201ENST00000636663 812 ntBASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 C17orf82-201ENST00000623772 1530 ntBASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LSMEM1Q8N8F7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LSMEM1Q8N8F7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSMEM1Q8N8F7 AC127496.7-201ENST00000625110 1798 ntBASIC20.24■□□□□ 0.83
LSMEM1Q8N8F7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSMEM1Q8N8F7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.24■□□□□ 0.83
LSMEM1Q8N8F7 AC009086.3-201ENST00000623486 1008 ntBASIC20.24■□□□□ 0.83
LSMEM1Q8N8F7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSMEM1Q8N8F7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LSMEM1Q8N8F7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSMEM1Q8N8F7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSMEM1Q8N8F7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSMEM1Q8N8F7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSMEM1Q8N8F7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSMEM1Q8N8F7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSMEM1Q8N8F7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSMEM1Q8N8F7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSMEM1Q8N8F7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LSMEM1Q8N8F7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.23■□□□□ 0.83
LSMEM1Q8N8F7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSMEM1Q8N8F7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LSMEM1Q8N8F7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.22■□□□□ 0.83
LSMEM1Q8N8F7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSMEM1Q8N8F7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSMEM1Q8N8F7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
LSMEM1Q8N8F7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
LSMEM1Q8N8F7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.22■□□□□ 0.83
LSMEM1Q8N8F7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSMEM1Q8N8F7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
LSMEM1Q8N8F7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.22■□□□□ 0.83
LSMEM1Q8N8F7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
LSMEM1Q8N8F7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
LSMEM1Q8N8F7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.22■□□□□ 0.83
LSMEM1Q8N8F7 ECEL1P1-201ENST00000373592 1742 ntBASIC20.22■□□□□ 0.83
LSMEM1Q8N8F7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LSMEM1Q8N8F7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LSMEM1Q8N8F7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSMEM1Q8N8F7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.21■□□□□ 0.83
LSMEM1Q8N8F7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.21■□□□□ 0.83
LSMEM1Q8N8F7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSMEM1Q8N8F7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LSMEM1Q8N8F7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.21■□□□□ 0.83
LSMEM1Q8N8F7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LSMEM1Q8N8F7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSMEM1Q8N8F7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.2■□□□□ 0.82
LSMEM1Q8N8F7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
LSMEM1Q8N8F7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSMEM1Q8N8F7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LSMEM1Q8N8F7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSMEM1Q8N8F7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LSMEM1Q8N8F7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSMEM1Q8N8F7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LSMEM1Q8N8F7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSMEM1Q8N8F7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LSMEM1Q8N8F7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSMEM1Q8N8F7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSMEM1Q8N8F7 AC242852.2-201ENST00000615738 1807 ntBASIC20.19■□□□□ 0.82
LSMEM1Q8N8F7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.19■□□□□ 0.82
LSMEM1Q8N8F7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.19■□□□□ 0.82
LSMEM1Q8N8F7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.19■□□□□ 0.82
LSMEM1Q8N8F7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LSMEM1Q8N8F7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.19■□□□□ 0.82
LSMEM1Q8N8F7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LSMEM1Q8N8F7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSMEM1Q8N8F7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms