Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.6■■□□□ 1.21
PCDH20Q8N6Y1 AF213884.3-201ENST00000563833 479 ntBASIC22.6■■□□□ 1.21
PCDH20Q8N6Y1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDH20Q8N6Y1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH20Q8N6Y1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH20Q8N6Y1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDH20Q8N6Y1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH20Q8N6Y1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH20Q8N6Y1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PCDH20Q8N6Y1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH20Q8N6Y1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 AC133637.1-201ENST00000624115 1537 ntBASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 MIR939-201ENST00000401314 82 ntBASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDH20Q8N6Y1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH20Q8N6Y1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH20Q8N6Y1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH20Q8N6Y1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDH20Q8N6Y1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDH20Q8N6Y1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH20Q8N6Y1 AL136967.2-201ENST00000623968 743 ntBASIC22.58■■□□□ 1.21
PCDH20Q8N6Y1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.58■■□□□ 1.2
PCDH20Q8N6Y1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
PCDH20Q8N6Y1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH20Q8N6Y1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH20Q8N6Y1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH20Q8N6Y1 AC091305.1-201ENST00000479476 895 ntBASIC22.57■■□□□ 1.2
PCDH20Q8N6Y1 AC027682.1-201ENST00000562846 899 ntBASIC22.57■■□□□ 1.2
PCDH20Q8N6Y1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDH20Q8N6Y1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDH20Q8N6Y1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH20Q8N6Y1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH20Q8N6Y1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PCDH20Q8N6Y1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDH20Q8N6Y1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDH20Q8N6Y1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH20Q8N6Y1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDH20Q8N6Y1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH20Q8N6Y1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.56■■□□□ 1.2
PCDH20Q8N6Y1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.56■■□□□ 1.2
PCDH20Q8N6Y1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.56■■□□□ 1.2
PCDH20Q8N6Y1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PCDH20Q8N6Y1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH20Q8N6Y1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PCDH20Q8N6Y1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH20Q8N6Y1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH20Q8N6Y1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDH20Q8N6Y1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PCDH20Q8N6Y1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH20Q8N6Y1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDH20Q8N6Y1 BX842568.3-201ENST00000418104 571 ntBASIC22.55■■□□□ 1.2
PCDH20Q8N6Y1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.55■■□□□ 1.2
PCDH20Q8N6Y1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
PCDH20Q8N6Y1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH20Q8N6Y1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH20Q8N6Y1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH20Q8N6Y1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDH20Q8N6Y1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDH20Q8N6Y1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
PCDH20Q8N6Y1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH20Q8N6Y1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH20Q8N6Y1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDH20Q8N6Y1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH20Q8N6Y1 AC233992.3-201ENST00000607491 485 ntBASIC22.54■■□□□ 1.2
PCDH20Q8N6Y1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH20Q8N6Y1 AL353803.4-201ENST00000565882 1934 ntBASIC22.54■■□□□ 1.2
PCDH20Q8N6Y1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDH20Q8N6Y1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH20Q8N6Y1 DUSP8P5-201ENST00000422884 1815 ntBASIC22.54■■□□□ 1.2
PCDH20Q8N6Y1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PCDH20Q8N6Y1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH20Q8N6Y1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
PCDH20Q8N6Y1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH20Q8N6Y1 RASA4CP-201ENST00000424092 1398 ntBASIC22.53■■□□□ 1.2
PCDH20Q8N6Y1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH20Q8N6Y1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH20Q8N6Y1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH20Q8N6Y1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH20Q8N6Y1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDH20Q8N6Y1 AC008764.7-201ENST00000593779 1081 ntBASIC22.53■■□□□ 1.2
PCDH20Q8N6Y1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDH20Q8N6Y1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH20Q8N6Y1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PCDH20Q8N6Y1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH20Q8N6Y1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms