Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST3H2BBQ8N257 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST3H2BBQ8N257 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HIST3H2BBQ8N257 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST3H2BBQ8N257 DYNLL1-208ENST00000550178 581 ntBASIC16.67■□□□□ 0.26
HIST3H2BBQ8N257 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST3H2BBQ8N257 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST3H2BBQ8N257 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST3H2BBQ8N257 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.67■□□□□ 0.26
HIST3H2BBQ8N257 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
HIST3H2BBQ8N257 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST3H2BBQ8N257 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIST3H2BBQ8N257 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST3H2BBQ8N257 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIST3H2BBQ8N257 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST3H2BBQ8N257 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
HIST3H2BBQ8N257 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST3H2BBQ8N257 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.66■□□□□ 0.26
HIST3H2BBQ8N257 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIST3H2BBQ8N257 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.66■□□□□ 0.26
HIST3H2BBQ8N257 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST3H2BBQ8N257 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HIST3H2BBQ8N257 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST3H2BBQ8N257 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
HIST3H2BBQ8N257 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST3H2BBQ8N257 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HIST3H2BBQ8N257 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST3H2BBQ8N257 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST3H2BBQ8N257 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST3H2BBQ8N257 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST3H2BBQ8N257 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
HIST3H2BBQ8N257 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST3H2BBQ8N257 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.64■□□□□ 0.25
HIST3H2BBQ8N257 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC16.64■□□□□ 0.25
HIST3H2BBQ8N257 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST3H2BBQ8N257 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST3H2BBQ8N257 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
HIST3H2BBQ8N257 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HIST3H2BBQ8N257 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST3H2BBQ8N257 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2BBQ8N257 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HIST3H2BBQ8N257 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2BBQ8N257 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.63■□□□□ 0.25
HIST3H2BBQ8N257 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2BBQ8N257 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2BBQ8N257 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2BBQ8N257 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2BBQ8N257 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2BBQ8N257 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2BBQ8N257 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2BBQ8N257 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.63■□□□□ 0.25
HIST3H2BBQ8N257 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST3H2BBQ8N257 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST3H2BBQ8N257 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST3H2BBQ8N257 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
HIST3H2BBQ8N257 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST3H2BBQ8N257 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST3H2BBQ8N257 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HIST3H2BBQ8N257 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HIST3H2BBQ8N257 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST3H2BBQ8N257 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST3H2BBQ8N257 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HIST3H2BBQ8N257 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST3H2BBQ8N257 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2BBQ8N257 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST3H2BBQ8N257 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2BBQ8N257 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HIST3H2BBQ8N257 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.61■□□□□ 0.25
HIST3H2BBQ8N257 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.61■□□□□ 0.25
HIST3H2BBQ8N257 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HIST3H2BBQ8N257 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2BBQ8N257 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HIST3H2BBQ8N257 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2BBQ8N257 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2BBQ8N257 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST3H2BBQ8N257 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST3H2BBQ8N257 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2BBQ8N257 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2BBQ8N257 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.6■□□□□ 0.25
HIST3H2BBQ8N257 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2BBQ8N257 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2BBQ8N257 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2BBQ8N257 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2BBQ8N257 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2BBQ8N257 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2BBQ8N257 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2BBQ8N257 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2BBQ8N257 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HIST3H2BBQ8N257 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2BBQ8N257 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST3H2BBQ8N257 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms