Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.13■□□□□ 0.97
CARFQ8N187 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CARFQ8N187 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CARFQ8N187 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CARFQ8N187 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CARFQ8N187 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CARFQ8N187 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CARFQ8N187 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CARFQ8N187 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CARFQ8N187 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CARFQ8N187 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CARFQ8N187 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.13■□□□□ 0.97
CARFQ8N187 AC087239.1-201ENST00000622671 572 ntBASIC21.13■□□□□ 0.97
CARFQ8N187 AC004687.1-201ENST00000579003 1625 ntBASIC21.13■□□□□ 0.97
CARFQ8N187 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CARFQ8N187 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.13■□□□□ 0.97
CARFQ8N187 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CARFQ8N187 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CARFQ8N187 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CARFQ8N187 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CARFQ8N187 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CARFQ8N187 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CARFQ8N187 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.12■□□□□ 0.97
CARFQ8N187 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CARFQ8N187 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CARFQ8N187 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CARFQ8N187 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CARFQ8N187 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.12■□□□□ 0.97
CARFQ8N187 YBX1P1-201ENST00000445822 960 ntBASIC21.12■□□□□ 0.97
CARFQ8N187 AC012414.1-201ENST00000556676 535 ntBASIC21.12■□□□□ 0.97
CARFQ8N187 AL031602.1-201ENST00000633169 911 ntBASIC21.12■□□□□ 0.97
CARFQ8N187 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CARFQ8N187 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CARFQ8N187 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.11■□□□□ 0.97
CARFQ8N187 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.11■□□□□ 0.97
CARFQ8N187 AC123595.1-201ENST00000440769 1046 ntBASIC21.11■□□□□ 0.97
CARFQ8N187 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CARFQ8N187 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.11■□□□□ 0.97
CARFQ8N187 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.11■□□□□ 0.97
CARFQ8N187 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CARFQ8N187 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CARFQ8N187 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CARFQ8N187 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CARFQ8N187 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CARFQ8N187 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CARFQ8N187 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CARFQ8N187 ANOS2P-203ENST00000472227 1816 ntBASIC21.11■□□□□ 0.97
CARFQ8N187 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CARFQ8N187 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CARFQ8N187 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.1■□□□□ 0.97
CARFQ8N187 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.1■□□□□ 0.97
CARFQ8N187 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.1■□□□□ 0.97
CARFQ8N187 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CARFQ8N187 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.1■□□□□ 0.97
CARFQ8N187 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.1■□□□□ 0.97
CARFQ8N187 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CARFQ8N187 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.1■□□□□ 0.97
CARFQ8N187 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.1■□□□□ 0.97
CARFQ8N187 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CARFQ8N187 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
CARFQ8N187 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CARFQ8N187 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CARFQ8N187 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.09■□□□□ 0.97
CARFQ8N187 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CARFQ8N187 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CARFQ8N187 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.09■□□□□ 0.97
CARFQ8N187 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.09■□□□□ 0.97
CARFQ8N187 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CARFQ8N187 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.08■□□□□ 0.97
CARFQ8N187 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CARFQ8N187 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
CARFQ8N187 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CARFQ8N187 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.08■□□□□ 0.97
CARFQ8N187 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.08■□□□□ 0.97
CARFQ8N187 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.08■□□□□ 0.97
CARFQ8N187 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.08■□□□□ 0.97
CARFQ8N187 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CARFQ8N187 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CARFQ8N187 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CARFQ8N187 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CARFQ8N187 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CARFQ8N187 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.07■□□□□ 0.96
CARFQ8N187 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CARFQ8N187 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.07■□□□□ 0.96
CARFQ8N187 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.07■□□□□ 0.96
CARFQ8N187 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CARFQ8N187 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CARFQ8N187 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CARFQ8N187 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
CARFQ8N187 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.07■□□□□ 0.96
CARFQ8N187 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CARFQ8N187 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CARFQ8N187 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
CARFQ8N187 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CARFQ8N187 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CARFQ8N187 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CARFQ8N187 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CARFQ8N187 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CARFQ8N187 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.06■□□□□ 0.96
CARFQ8N187 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms