Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.03■■□□□ 1.12
TRIM42Q8IWZ5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM42Q8IWZ5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM42Q8IWZ5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
TRIM42Q8IWZ5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM42Q8IWZ5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM42Q8IWZ5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.02■■□□□ 1.12
TRIM42Q8IWZ5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM42Q8IWZ5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM42Q8IWZ5 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM42Q8IWZ5 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.02■■□□□ 1.12
TRIM42Q8IWZ5 AC004987.1-201ENST00000428627 508 ntBASIC22.02■■□□□ 1.12
TRIM42Q8IWZ5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM42Q8IWZ5 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM42Q8IWZ5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.02■■□□□ 1.12
TRIM42Q8IWZ5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
TRIM42Q8IWZ5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM42Q8IWZ5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
TRIM42Q8IWZ5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM42Q8IWZ5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM42Q8IWZ5 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM42Q8IWZ5 ATP5G2P3-201ENST00000429083 425 ntBASIC22.01■■□□□ 1.11
TRIM42Q8IWZ5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM42Q8IWZ5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.01■■□□□ 1.11
TRIM42Q8IWZ5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.01■■□□□ 1.11
TRIM42Q8IWZ5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
TRIM42Q8IWZ5 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM42Q8IWZ5 TSPY13P-201ENST00000338964 914 ntBASIC22■■□□□ 1.11
TRIM42Q8IWZ5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM42Q8IWZ5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM42Q8IWZ5 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
TRIM42Q8IWZ5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
TRIM42Q8IWZ5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRIM42Q8IWZ5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM42Q8IWZ5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
TRIM42Q8IWZ5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM42Q8IWZ5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.99■■□□□ 1.11
TRIM42Q8IWZ5 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
TRIM42Q8IWZ5 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM42Q8IWZ5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM42Q8IWZ5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM42Q8IWZ5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM42Q8IWZ5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM42Q8IWZ5 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.99■■□□□ 1.11
TRIM42Q8IWZ5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM42Q8IWZ5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM42Q8IWZ5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM42Q8IWZ5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM42Q8IWZ5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.98■■□□□ 1.11
TRIM42Q8IWZ5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.98■■□□□ 1.11
TRIM42Q8IWZ5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
TRIM42Q8IWZ5 AL137060.1-201ENST00000618151 2648 ntBASIC21.98■■□□□ 1.11
TRIM42Q8IWZ5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.98■■□□□ 1.11
TRIM42Q8IWZ5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM42Q8IWZ5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM42Q8IWZ5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM42Q8IWZ5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM42Q8IWZ5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM42Q8IWZ5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM42Q8IWZ5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM42Q8IWZ5 AC022616.5-201ENST00000518796 181 ntBASIC21.97■■□□□ 1.11
TRIM42Q8IWZ5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM42Q8IWZ5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM42Q8IWZ5 AC080038.3-201ENST00000623346 1952 ntBASIC21.97■■□□□ 1.11
TRIM42Q8IWZ5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM42Q8IWZ5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM42Q8IWZ5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM42Q8IWZ5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TRIM42Q8IWZ5 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM42Q8IWZ5 DUX4L9-201ENST00000449051 1259 ntBASIC21.96■■□□□ 1.11
TRIM42Q8IWZ5 DUX4L18-201ENST00000553347 1267 ntBASIC21.96■■□□□ 1.11
TRIM42Q8IWZ5 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM42Q8IWZ5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM42Q8IWZ5 FBXW4P1-201ENST00000426721 2239 ntBASIC21.96■■□□□ 1.11
TRIM42Q8IWZ5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM42Q8IWZ5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM42Q8IWZ5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM42Q8IWZ5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM42Q8IWZ5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM42Q8IWZ5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.95■■□□□ 1.11
TRIM42Q8IWZ5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TRIM42Q8IWZ5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.95■■□□□ 1.1
TRIM42Q8IWZ5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM42Q8IWZ5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TRIM42Q8IWZ5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM42Q8IWZ5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM42Q8IWZ5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM42Q8IWZ5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.95■■□□□ 1.1
TRIM42Q8IWZ5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM42Q8IWZ5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM42Q8IWZ5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM42Q8IWZ5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM42Q8IWZ5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
TRIM42Q8IWZ5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TRIM42Q8IWZ5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TRIM42Q8IWZ5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM42Q8IWZ5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.94■■□□□ 1.1
TRIM42Q8IWZ5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM42Q8IWZ5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
TRIM42Q8IWZ5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms