Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRTM4Q86VH4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
LRRTM4Q86VH4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRRTM4Q86VH4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRRTM4Q86VH4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRTM4Q86VH4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRTM4Q86VH4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.77■■□□□ 1.08
LRRTM4Q86VH4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.77■■□□□ 1.08
LRRTM4Q86VH4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRTM4Q86VH4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRTM4Q86VH4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.77■■□□□ 1.08
LRRTM4Q86VH4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LRRTM4Q86VH4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRRTM4Q86VH4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRRTM4Q86VH4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRTM4Q86VH4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRRTM4Q86VH4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRTM4Q86VH4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRTM4Q86VH4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.76■■□□□ 1.07
LRRTM4Q86VH4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRRTM4Q86VH4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRRTM4Q86VH4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.76■■□□□ 1.07
LRRTM4Q86VH4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.76■■□□□ 1.07
LRRTM4Q86VH4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.76■■□□□ 1.07
LRRTM4Q86VH4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.76■■□□□ 1.07
LRRTM4Q86VH4 CA15P2-201ENST00000611168 834 ntBASIC21.76■■□□□ 1.07
LRRTM4Q86VH4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.75■■□□□ 1.07
LRRTM4Q86VH4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
LRRTM4Q86VH4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.75■■□□□ 1.07
LRRTM4Q86VH4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.75■■□□□ 1.07
LRRTM4Q86VH4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LRRTM4Q86VH4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LRRTM4Q86VH4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.75■■□□□ 1.07
LRRTM4Q86VH4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LRRTM4Q86VH4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRRTM4Q86VH4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.75■■□□□ 1.07
LRRTM4Q86VH4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.75■■□□□ 1.07
LRRTM4Q86VH4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.75■■□□□ 1.07
LRRTM4Q86VH4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRRTM4Q86VH4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
LRRTM4Q86VH4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
LRRTM4Q86VH4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRRTM4Q86VH4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRRTM4Q86VH4 AC010525.1-201ENST00000585559 441 ntBASIC21.74■■□□□ 1.07
LRRTM4Q86VH4 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.74■■□□□ 1.07
LRRTM4Q86VH4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRRTM4Q86VH4 DUSP8P3-201ENST00000399571 1760 ntBASIC21.74■■□□□ 1.07
LRRTM4Q86VH4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRTM4Q86VH4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
LRRTM4Q86VH4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRTM4Q86VH4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
LRRTM4Q86VH4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
LRRTM4Q86VH4 AC126544.1-201ENST00000580842 1059 ntBASIC21.73■■□□□ 1.07
LRRTM4Q86VH4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.73■■□□□ 1.07
LRRTM4Q86VH4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRTM4Q86VH4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRTM4Q86VH4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRTM4Q86VH4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRTM4Q86VH4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
LRRTM4Q86VH4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRTM4Q86VH4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.72■■□□□ 1.07
LRRTM4Q86VH4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRRTM4Q86VH4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRTM4Q86VH4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRTM4Q86VH4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRTM4Q86VH4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.72■■□□□ 1.07
LRRTM4Q86VH4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.71■■□□□ 1.07
LRRTM4Q86VH4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
LRRTM4Q86VH4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRTM4Q86VH4 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.71■■□□□ 1.07
LRRTM4Q86VH4 AC105265.2-201ENST00000467189 838 ntBASIC21.71■■□□□ 1.07
LRRTM4Q86VH4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.71■■□□□ 1.07
LRRTM4Q86VH4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.71■■□□□ 1.07
LRRTM4Q86VH4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRTM4Q86VH4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
LRRTM4Q86VH4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
LRRTM4Q86VH4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRTM4Q86VH4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRTM4Q86VH4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRTM4Q86VH4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.71■■□□□ 1.07
LRRTM4Q86VH4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.7■■□□□ 1.06
LRRTM4Q86VH4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRTM4Q86VH4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.7■■□□□ 1.06
LRRTM4Q86VH4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRTM4Q86VH4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LRRTM4Q86VH4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.7■■□□□ 1.06
LRRTM4Q86VH4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.7■■□□□ 1.06
LRRTM4Q86VH4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRTM4Q86VH4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRTM4Q86VH4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
LRRTM4Q86VH4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
LRRTM4Q86VH4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRTM4Q86VH4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
LRRTM4Q86VH4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LRRTM4Q86VH4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRTM4Q86VH4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LRRTM4Q86VH4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRRTM4Q86VH4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.69■■□□□ 1.06
LRRTM4Q86VH4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRRTM4Q86VH4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms