Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSMD2Q7Z408 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CSMD2Q7Z408 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.94■□□□□ 0.62
CSMD2Q7Z408 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.94■□□□□ 0.62
CSMD2Q7Z408 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD2Q7Z408 AC105233.4-201ENST00000642045 216 ntBASIC18.94■□□□□ 0.62
CSMD2Q7Z408 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CSMD2Q7Z408 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD2Q7Z408 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD2Q7Z408 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD2Q7Z408 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD2Q7Z408 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSMD2Q7Z408 KRT18P11-201ENST00000435214 1283 ntBASIC18.94■□□□□ 0.62
CSMD2Q7Z408 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CSMD2Q7Z408 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CSMD2Q7Z408 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CSMD2Q7Z408 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.93■□□□□ 0.62
CSMD2Q7Z408 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.93■□□□□ 0.62
CSMD2Q7Z408 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSMD2Q7Z408 AC010525.1-201ENST00000585559 441 ntBASIC18.93■□□□□ 0.62
CSMD2Q7Z408 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CSMD2Q7Z408 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSMD2Q7Z408 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSMD2Q7Z408 OR2I1P-207ENST00000453522 948 ntBASIC18.93■□□□□ 0.62
CSMD2Q7Z408 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.92■□□□□ 0.62
CSMD2Q7Z408 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD2Q7Z408 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.92■□□□□ 0.62
CSMD2Q7Z408 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD2Q7Z408 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CSMD2Q7Z408 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD2Q7Z408 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD2Q7Z408 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD2Q7Z408 POU5F1P3-201ENST00000428824 1078 ntBASIC18.92■□□□□ 0.62
CSMD2Q7Z408 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.92■□□□□ 0.62
CSMD2Q7Z408 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD2Q7Z408 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD2Q7Z408 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CSMD2Q7Z408 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSMD2Q7Z408 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CSMD2Q7Z408 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.91■□□□□ 0.62
CSMD2Q7Z408 FAM201B-201ENST00000458407 597 ntBASIC18.91■□□□□ 0.62
CSMD2Q7Z408 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CSMD2Q7Z408 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CSMD2Q7Z408 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSMD2Q7Z408 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.91■□□□□ 0.62
CSMD2Q7Z408 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CSMD2Q7Z408 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSMD2Q7Z408 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSMD2Q7Z408 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSMD2Q7Z408 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSMD2Q7Z408 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSMD2Q7Z408 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSMD2Q7Z408 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CSMD2Q7Z408 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSMD2Q7Z408 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.9■□□□□ 0.62
CSMD2Q7Z408 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSMD2Q7Z408 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
CSMD2Q7Z408 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CSMD2Q7Z408 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSMD2Q7Z408 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSMD2Q7Z408 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.89■□□□□ 0.61
CSMD2Q7Z408 DUX4L4-201ENST00000566884 1269 ntBASIC18.89■□□□□ 0.61
CSMD2Q7Z408 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSMD2Q7Z408 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CSMD2Q7Z408 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CSMD2Q7Z408 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.89■□□□□ 0.61
CSMD2Q7Z408 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.89■□□□□ 0.61
CSMD2Q7Z408 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CSMD2Q7Z408 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CSMD2Q7Z408 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 DUSP5P2-201ENST00000426873 1033 ntBASIC18.88■□□□□ 0.61
CSMD2Q7Z408 GCSHP5-201ENST00000443090 522 ntBASIC18.88■□□□□ 0.61
CSMD2Q7Z408 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD2Q7Z408 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSMD2Q7Z408 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CSMD2Q7Z408 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CSMD2Q7Z408 BX005040.4-201ENST00000637145 1518 ntBASIC18.87■□□□□ 0.61
CSMD2Q7Z408 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSMD2Q7Z408 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CSMD2Q7Z408 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSMD2Q7Z408 UBE2DNL-204ENST00000602536 740 ntBASIC18.87■□□□□ 0.61
CSMD2Q7Z408 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSMD2Q7Z408 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CSMD2Q7Z408 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms