Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
RGPD4Q7Z3J3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC28.7■■■□□ 2.18
RGPD4Q7Z3J3 AC083906.2-201ENST00000511578 360 ntBASIC28.7■■■□□ 2.18
RGPD4Q7Z3J3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC28.7■■■□□ 2.18
RGPD4Q7Z3J3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC28.7■■■□□ 2.18
RGPD4Q7Z3J3 SLC6A10P-202ENST00000431994 2058 ntBASIC28.69■■■□□ 2.18
RGPD4Q7Z3J3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC28.69■■■□□ 2.18
RGPD4Q7Z3J3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RGPD4Q7Z3J3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC28.69■■■□□ 2.18
RGPD4Q7Z3J3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
RGPD4Q7Z3J3 AC098590.1-201ENST00000468126 897 ntBASIC28.69■■■□□ 2.18
RGPD4Q7Z3J3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC28.68■■■□□ 2.18
RGPD4Q7Z3J3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC28.68■■■□□ 2.18
RGPD4Q7Z3J3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
RGPD4Q7Z3J3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC28.68■■■□□ 2.18
RGPD4Q7Z3J3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
RGPD4Q7Z3J3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.68■■■□□ 2.18
RGPD4Q7Z3J3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC28.67■■■□□ 2.18
RGPD4Q7Z3J3 TESC-206ENST00000541210 936 ntTSL 3 BASIC28.67■■■□□ 2.18
RGPD4Q7Z3J3 AC005181.1-201ENST00000604782 1256 ntBASIC28.67■■■□□ 2.18
RGPD4Q7Z3J3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.67■■■□□ 2.18
RGPD4Q7Z3J3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.67■■■□□ 2.18
RGPD4Q7Z3J3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.67■■■□□ 2.18
RGPD4Q7Z3J3 FP325331.1-202ENST00000623531 1380 ntBASIC28.67■■■□□ 2.18
RGPD4Q7Z3J3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
RGPD4Q7Z3J3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC28.66■■■□□ 2.18
RGPD4Q7Z3J3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
RGPD4Q7Z3J3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC28.66■■■□□ 2.18
RGPD4Q7Z3J3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC28.66■■■□□ 2.18
RGPD4Q7Z3J3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC28.66■■■□□ 2.18
RGPD4Q7Z3J3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
RGPD4Q7Z3J3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC28.65■■■□□ 2.18
RGPD4Q7Z3J3 RPS2P52-201ENST00000469610 820 ntBASIC28.65■■■□□ 2.18
RGPD4Q7Z3J3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC28.65■■■□□ 2.18
RGPD4Q7Z3J3 UBE2DNL-204ENST00000602536 740 ntBASIC28.65■■■□□ 2.18
RGPD4Q7Z3J3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RGPD4Q7Z3J3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
RGPD4Q7Z3J3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RGPD4Q7Z3J3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
RGPD4Q7Z3J3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
RGPD4Q7Z3J3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
RGPD4Q7Z3J3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.64■■■□□ 2.18
RGPD4Q7Z3J3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC28.64■■■□□ 2.18
RGPD4Q7Z3J3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC28.64■■■□□ 2.18
RGPD4Q7Z3J3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC28.64■■■□□ 2.18
RGPD4Q7Z3J3 AC139426.1-201ENST00000568218 2529 ntBASIC28.64■■■□□ 2.18
RGPD4Q7Z3J3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
RGPD4Q7Z3J3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
RGPD4Q7Z3J3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC28.64■■■□□ 2.18
RGPD4Q7Z3J3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC28.64■■■□□ 2.18
RGPD4Q7Z3J3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
RGPD4Q7Z3J3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RGPD4Q7Z3J3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC28.63■■■□□ 2.17
RGPD4Q7Z3J3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC28.63■■■□□ 2.17
RGPD4Q7Z3J3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
RGPD4Q7Z3J3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.63■■■□□ 2.17
RGPD4Q7Z3J3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RGPD4Q7Z3J3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RGPD4Q7Z3J3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC28.62■■■□□ 2.17
RGPD4Q7Z3J3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC28.62■■■□□ 2.17
RGPD4Q7Z3J3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC28.62■■■□□ 2.17
RGPD4Q7Z3J3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
RGPD4Q7Z3J3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC28.62■■■□□ 2.17
RGPD4Q7Z3J3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
RGPD4Q7Z3J3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC28.62■■■□□ 2.17
RGPD4Q7Z3J3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC28.62■■■□□ 2.17
RGPD4Q7Z3J3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC28.62■■■□□ 2.17
RGPD4Q7Z3J3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
RGPD4Q7Z3J3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC28.62■■■□□ 2.17
RGPD4Q7Z3J3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RGPD4Q7Z3J3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
RGPD4Q7Z3J3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RGPD4Q7Z3J3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
RGPD4Q7Z3J3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
RGPD4Q7Z3J3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
RGPD4Q7Z3J3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC28.61■■■□□ 2.17
RGPD4Q7Z3J3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
RGPD4Q7Z3J3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC28.61■■■□□ 2.17
RGPD4Q7Z3J3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
RGPD4Q7Z3J3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
RGPD4Q7Z3J3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RGPD4Q7Z3J3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC28.6■■■□□ 2.17
RGPD4Q7Z3J3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
RGPD4Q7Z3J3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
RGPD4Q7Z3J3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RGPD4Q7Z3J3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RGPD4Q7Z3J3 PRORSD1P-201ENST00000295112 541 ntBASIC28.6■■■□□ 2.17
RGPD4Q7Z3J3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC28.6■■■□□ 2.17
RGPD4Q7Z3J3 AC007322.1-201ENST00000426983 750 ntBASIC28.6■■■□□ 2.17
RGPD4Q7Z3J3 CNN2P6-201ENST00000439038 900 ntBASIC28.6■■■□□ 2.17
RGPD4Q7Z3J3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC28.6■■■□□ 2.17
RGPD4Q7Z3J3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
RGPD4Q7Z3J3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.59■■■□□ 2.17
RGPD4Q7Z3J3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.59■■■□□ 2.17
RGPD4Q7Z3J3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.59■■■□□ 2.17
RGPD4Q7Z3J3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.59■■■□□ 2.17
RGPD4Q7Z3J3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RGPD4Q7Z3J3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC28.59■■■□□ 2.17
RGPD4Q7Z3J3 AC079140.4-201ENST00000507448 529 ntBASIC28.59■■■□□ 2.17
RGPD4Q7Z3J3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC28.59■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms