Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C9orf139Q6ZV77 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.92■□□□□ 0.46
C9orf139Q6ZV77 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C9orf139Q6ZV77 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C9orf139Q6ZV77 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.92■□□□□ 0.46
C9orf139Q6ZV77 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
C9orf139Q6ZV77 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.92■□□□□ 0.46
C9orf139Q6ZV77 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.92■□□□□ 0.46
C9orf139Q6ZV77 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C9orf139Q6ZV77 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.91■□□□□ 0.46
C9orf139Q6ZV77 AL139125.2-201ENST00000623134 1869 ntBASIC17.91■□□□□ 0.46
C9orf139Q6ZV77 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.91■□□□□ 0.46
C9orf139Q6ZV77 AL031602.1-201ENST00000633169 911 ntBASIC17.91■□□□□ 0.46
C9orf139Q6ZV77 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
C9orf139Q6ZV77 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 KRT18P5-201ENST00000436075 1291 ntBASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 DUX4L2-201ENST00000561772 1275 ntBASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 DUX4L6-201ENST00000626483 1275 ntBASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 DUX4L1-201ENST00000627662 1275 ntBASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 DUX4L8-201ENST00000629013 1275 ntBASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 DUX4L3-201ENST00000630187 1275 ntBASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 DUX4L7-201ENST00000630678 1275 ntBASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 DUX4L5-201ENST00000630834 1275 ntBASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C9orf139Q6ZV77 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
C9orf139Q6ZV77 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.89■□□□□ 0.46
C9orf139Q6ZV77 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C9orf139Q6ZV77 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.89■□□□□ 0.45
C9orf139Q6ZV77 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
C9orf139Q6ZV77 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
C9orf139Q6ZV77 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
C9orf139Q6ZV77 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C9orf139Q6ZV77 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.89■□□□□ 0.45
C9orf139Q6ZV77 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
C9orf139Q6ZV77 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.89■□□□□ 0.45
C9orf139Q6ZV77 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.89■□□□□ 0.45
C9orf139Q6ZV77 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
C9orf139Q6ZV77 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C9orf139Q6ZV77 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
C9orf139Q6ZV77 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
C9orf139Q6ZV77 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C9orf139Q6ZV77 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
C9orf139Q6ZV77 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.88■□□□□ 0.45
C9orf139Q6ZV77 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
C9orf139Q6ZV77 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.88■□□□□ 0.45
C9orf139Q6ZV77 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.88■□□□□ 0.45
C9orf139Q6ZV77 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.88■□□□□ 0.45
C9orf139Q6ZV77 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
C9orf139Q6ZV77 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.88■□□□□ 0.45
C9orf139Q6ZV77 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
C9orf139Q6ZV77 MIR6084-201ENST00000622012 110 ntBASIC17.88■□□□□ 0.45
C9orf139Q6ZV77 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
C9orf139Q6ZV77 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.88■□□□□ 0.45
C9orf139Q6ZV77 LINC02228-203ENST00000641970 1355 ntBASIC17.88■□□□□ 0.45
C9orf139Q6ZV77 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C9orf139Q6ZV77 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 TERF1P2-201ENST00000583350 1212 ntBASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 AC068587.7-201ENST00000641602 218 ntBASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
C9orf139Q6ZV77 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.86■□□□□ 0.45
C9orf139Q6ZV77 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf139Q6ZV77 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf139Q6ZV77 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf139Q6ZV77 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf139Q6ZV77 CCDC92B-201ENST00000575506 885 ntBASIC17.86■□□□□ 0.45
C9orf139Q6ZV77 AC022517.1-201ENST00000592429 346 ntBASIC17.86■□□□□ 0.45
C9orf139Q6ZV77 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
C9orf139Q6ZV77 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.86■□□□□ 0.45
C9orf139Q6ZV77 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf139Q6ZV77 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.86■□□□□ 0.45
C9orf139Q6ZV77 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf139Q6ZV77 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf139Q6ZV77 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf139Q6ZV77 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf139Q6ZV77 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
C9orf139Q6ZV77 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C9orf139Q6ZV77 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms