Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C11orf88Q6PI97 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.12■□□□□ 0.65
C11orf88Q6PI97 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C11orf88Q6PI97 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.12■□□□□ 0.65
C11orf88Q6PI97 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
C11orf88Q6PI97 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C11orf88Q6PI97 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
C11orf88Q6PI97 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C11orf88Q6PI97 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C11orf88Q6PI97 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.12■□□□□ 0.65
C11orf88Q6PI97 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
C11orf88Q6PI97 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.12■□□□□ 0.65
C11orf88Q6PI97 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.12■□□□□ 0.65
C11orf88Q6PI97 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C11orf88Q6PI97 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
C11orf88Q6PI97 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
C11orf88Q6PI97 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C11orf88Q6PI97 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
C11orf88Q6PI97 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C11orf88Q6PI97 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
C11orf88Q6PI97 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C11orf88Q6PI97 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
C11orf88Q6PI97 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C11orf88Q6PI97 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C11orf88Q6PI97 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
C11orf88Q6PI97 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C11orf88Q6PI97 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.11■□□□□ 0.65
C11orf88Q6PI97 AC087393.1-201ENST00000582896 145 ntBASIC19.11■□□□□ 0.65
C11orf88Q6PI97 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C11orf88Q6PI97 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
C11orf88Q6PI97 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
C11orf88Q6PI97 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C11orf88Q6PI97 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C11orf88Q6PI97 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
C11orf88Q6PI97 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C11orf88Q6PI97 KRT8P33-201ENST00000508125 1423 ntBASIC19.1■□□□□ 0.65
C11orf88Q6PI97 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C11orf88Q6PI97 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C11orf88Q6PI97 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
C11orf88Q6PI97 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C11orf88Q6PI97 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
C11orf88Q6PI97 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
C11orf88Q6PI97 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.1■□□□□ 0.65
C11orf88Q6PI97 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
C11orf88Q6PI97 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
C11orf88Q6PI97 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
C11orf88Q6PI97 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
C11orf88Q6PI97 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
C11orf88Q6PI97 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C11orf88Q6PI97 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
C11orf88Q6PI97 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C11orf88Q6PI97 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.09■□□□□ 0.65
C11orf88Q6PI97 AC092068.2-201ENST00000590491 1708 ntBASIC19.09■□□□□ 0.65
C11orf88Q6PI97 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C11orf88Q6PI97 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C11orf88Q6PI97 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C11orf88Q6PI97 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C11orf88Q6PI97 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.09■□□□□ 0.65
C11orf88Q6PI97 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
C11orf88Q6PI97 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C11orf88Q6PI97 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C11orf88Q6PI97 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C11orf88Q6PI97 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
C11orf88Q6PI97 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
C11orf88Q6PI97 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
C11orf88Q6PI97 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
C11orf88Q6PI97 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.65
C11orf88Q6PI97 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.65
C11orf88Q6PI97 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
C11orf88Q6PI97 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
C11orf88Q6PI97 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.08■□□□□ 0.64
C11orf88Q6PI97 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C11orf88Q6PI97 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
C11orf88Q6PI97 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C11orf88Q6PI97 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
C11orf88Q6PI97 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C11orf88Q6PI97 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C11orf88Q6PI97 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C11orf88Q6PI97 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
C11orf88Q6PI97 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C11orf88Q6PI97 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
C11orf88Q6PI97 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.08■□□□□ 0.64
C11orf88Q6PI97 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
C11orf88Q6PI97 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
C11orf88Q6PI97 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
C11orf88Q6PI97 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C11orf88Q6PI97 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
C11orf88Q6PI97 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
C11orf88Q6PI97 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C11orf88Q6PI97 RPS2P7-201ENST00000447334 885 ntBASIC19.07■□□□□ 0.64
C11orf88Q6PI97 AC009299.2-201ENST00000482477 511 ntBASIC19.07■□□□□ 0.64
C11orf88Q6PI97 AC103834.1-201ENST00000520383 144 ntBASIC19.07■□□□□ 0.64
C11orf88Q6PI97 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
C11orf88Q6PI97 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C11orf88Q6PI97 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
C11orf88Q6PI97 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
C11orf88Q6PI97 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
C11orf88Q6PI97 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
C11orf88Q6PI97 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
C11orf88Q6PI97 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms