Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RBM48Q5RL73 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RBM48Q5RL73 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.22■□□□□ 0.83
RBM48Q5RL73 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.22■□□□□ 0.83
RBM48Q5RL73 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RBM48Q5RL73 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RBM48Q5RL73 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.22■□□□□ 0.83
RBM48Q5RL73 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.22■□□□□ 0.83
RBM48Q5RL73 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.22■□□□□ 0.83
RBM48Q5RL73 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RBM48Q5RL73 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RBM48Q5RL73 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RBM48Q5RL73 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RBM48Q5RL73 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RBM48Q5RL73 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RBM48Q5RL73 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RBM48Q5RL73 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.21■□□□□ 0.83
RBM48Q5RL73 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RBM48Q5RL73 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
RBM48Q5RL73 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RBM48Q5RL73 AC092296.2-201ENST00000589470 999 ntBASIC20.21■□□□□ 0.83
RBM48Q5RL73 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RBM48Q5RL73 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RBM48Q5RL73 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RBM48Q5RL73 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RBM48Q5RL73 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.83
RBM48Q5RL73 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.2■□□□□ 0.83
RBM48Q5RL73 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.2■□□□□ 0.82
RBM48Q5RL73 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RBM48Q5RL73 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
RBM48Q5RL73 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.2■□□□□ 0.82
RBM48Q5RL73 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RBM48Q5RL73 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RBM48Q5RL73 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RBM48Q5RL73 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RBM48Q5RL73 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RBM48Q5RL73 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RBM48Q5RL73 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RBM48Q5RL73 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RBM48Q5RL73 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.19■□□□□ 0.82
RBM48Q5RL73 MIR3648-2-201ENST00000581792 180 ntBASIC20.19■□□□□ 0.82
RBM48Q5RL73 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RBM48Q5RL73 MIR3648-1-201ENST00000615959 180 ntBASIC20.19■□□□□ 0.82
RBM48Q5RL73 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RBM48Q5RL73 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RBM48Q5RL73 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RBM48Q5RL73 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.19■□□□□ 0.82
RBM48Q5RL73 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RBM48Q5RL73 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RBM48Q5RL73 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RBM48Q5RL73 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RBM48Q5RL73 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.18■□□□□ 0.82
RBM48Q5RL73 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.18■□□□□ 0.82
RBM48Q5RL73 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RBM48Q5RL73 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RBM48Q5RL73 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RBM48Q5RL73 AL353803.4-201ENST00000565882 1934 ntBASIC20.18■□□□□ 0.82
RBM48Q5RL73 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RBM48Q5RL73 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RBM48Q5RL73 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
RBM48Q5RL73 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RBM48Q5RL73 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RBM48Q5RL73 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RBM48Q5RL73 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RBM48Q5RL73 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.17■□□□□ 0.82
RBM48Q5RL73 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RBM48Q5RL73 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RBM48Q5RL73 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RBM48Q5RL73 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.17■□□□□ 0.82
RBM48Q5RL73 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.17■□□□□ 0.82
RBM48Q5RL73 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RBM48Q5RL73 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.17■□□□□ 0.82
RBM48Q5RL73 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.17■□□□□ 0.82
RBM48Q5RL73 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RBM48Q5RL73 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
RBM48Q5RL73 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RBM48Q5RL73 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RBM48Q5RL73 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RBM48Q5RL73 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RBM48Q5RL73 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RBM48Q5RL73 ECEL1P2-201ENST00000461596 1295 ntBASIC20.16■□□□□ 0.82
RBM48Q5RL73 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RBM48Q5RL73 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RBM48Q5RL73 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
RBM48Q5RL73 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RBM48Q5RL73 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RBM48Q5RL73 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RBM48Q5RL73 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RBM48Q5RL73 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.15■□□□□ 0.82
RBM48Q5RL73 AC131274.2-201ENST00000580697 1507 ntBASIC20.15■□□□□ 0.82
RBM48Q5RL73 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RBM48Q5RL73 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RBM48Q5RL73 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RBM48Q5RL73 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RBM48Q5RL73 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RBM48Q5RL73 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
RBM48Q5RL73 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
RBM48Q5RL73 AC244015.2-201ENST00000616358 1861 ntBASIC20.14■□□□□ 0.81
RBM48Q5RL73 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.14■□□□□ 0.81
RBM48Q5RL73 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms