Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
ATP6AP1LQ52LC2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.38■■□□□ 1.01
ATP6AP1LQ52LC2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
ATP6AP1LQ52LC2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP6AP1LQ52LC2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ATP6AP1LQ52LC2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6AP1LQ52LC2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.37■■□□□ 1.01
ATP6AP1LQ52LC2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.37■■□□□ 1.01
ATP6AP1LQ52LC2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6AP1LQ52LC2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
ATP6AP1LQ52LC2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6AP1LQ52LC2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6AP1LQ52LC2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6AP1LQ52LC2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
ATP6AP1LQ52LC2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6AP1LQ52LC2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6AP1LQ52LC2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 AC005703.6-201ENST00000623265 1329 ntBASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6AP1LQ52LC2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
ATP6AP1LQ52LC2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6AP1LQ52LC2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6AP1LQ52LC2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
ATP6AP1LQ52LC2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
ATP6AP1LQ52LC2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6AP1LQ52LC2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.35■■□□□ 1.01
ATP6AP1LQ52LC2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.35■■□□□ 1.01
ATP6AP1LQ52LC2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6AP1LQ52LC2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6AP1LQ52LC2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
ATP6AP1LQ52LC2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6AP1LQ52LC2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.34■■□□□ 1.01
ATP6AP1LQ52LC2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6AP1LQ52LC2 AC137767.1-201ENST00000602918 1920 ntBASIC21.34■■□□□ 1.01
ATP6AP1LQ52LC2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6AP1LQ52LC2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6AP1LQ52LC2 MIR6722-201ENST00000617286 78 ntBASIC21.34■■□□□ 1.01
ATP6AP1LQ52LC2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6AP1LQ52LC2 LINC01529-204ENST00000636474 1715 ntBASIC21.34■■□□□ 1.01
ATP6AP1LQ52LC2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6AP1LQ52LC2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.33■■□□□ 1.01
ATP6AP1LQ52LC2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP6AP1LQ52LC2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP6AP1LQ52LC2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP6AP1LQ52LC2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.33■■□□□ 1.01
ATP6AP1LQ52LC2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.33■■□□□ 1.01
ATP6AP1LQ52LC2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
ATP6AP1LQ52LC2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.33■■□□□ 1
ATP6AP1LQ52LC2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.33■■□□□ 1
ATP6AP1LQ52LC2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
ATP6AP1LQ52LC2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATP6AP1LQ52LC2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP6AP1LQ52LC2 AC092053.2-201ENST00000640557 1818 ntBASIC21.32■■□□□ 1
ATP6AP1LQ52LC2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
ATP6AP1LQ52LC2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.32■■□□□ 1
ATP6AP1LQ52LC2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.32■■□□□ 1
ATP6AP1LQ52LC2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP6AP1LQ52LC2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ATP6AP1LQ52LC2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP6AP1LQ52LC2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP6AP1LQ52LC2 AC139530.1-201ENST00000575312 1977 ntBASIC21.32■■□□□ 1
ATP6AP1LQ52LC2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP6AP1LQ52LC2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ATP6AP1LQ52LC2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.32■■□□□ 1
ATP6AP1LQ52LC2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 AC021242.3-201ENST00000607598 1377 ntBASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 FP325331.1-202ENST00000623531 1380 ntBASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP6AP1LQ52LC2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms