Protein–RNA interactions for Protein: Q504U0

C4orf46, Renal cancer differentiation gene 1 protein, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46Q504U0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C4orf46Q504U0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.73■□□□□ 0.59
C4orf46Q504U0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
C4orf46Q504U0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.73■□□□□ 0.59
C4orf46Q504U0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C4orf46Q504U0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C4orf46Q504U0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
C4orf46Q504U0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.72■□□□□ 0.59
C4orf46Q504U0 AC138932.1-201ENST00000534164 6830 ntBASIC18.72■□□□□ 0.59
C4orf46Q504U0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
C4orf46Q504U0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
C4orf46Q504U0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
C4orf46Q504U0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C4orf46Q504U0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C4orf46Q504U0 AC073130.3-201ENST00000624389 2278 ntBASIC18.72■□□□□ 0.59
C4orf46Q504U0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
C4orf46Q504U0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C4orf46Q504U0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
C4orf46Q504U0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C4orf46Q504U0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
C4orf46Q504U0 AC090877.2-201ENST00000558441 1738 ntBASIC18.71■□□□□ 0.59
C4orf46Q504U0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.71■□□□□ 0.59
C4orf46Q504U0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.71■□□□□ 0.59
C4orf46Q504U0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
C4orf46Q504U0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.71■□□□□ 0.59
C4orf46Q504U0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
C4orf46Q504U0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf46Q504U0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.71■□□□□ 0.59
C4orf46Q504U0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf46Q504U0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf46Q504U0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.71■□□□□ 0.59
C4orf46Q504U0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
C4orf46Q504U0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf46Q504U0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf46Q504U0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf46Q504U0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.71■□□□□ 0.59
C4orf46Q504U0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf46Q504U0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C4orf46Q504U0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.71■□□□□ 0.59
C4orf46Q504U0 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.71■□□□□ 0.59
C4orf46Q504U0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.71■□□□□ 0.59
C4orf46Q504U0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
C4orf46Q504U0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
C4orf46Q504U0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf46Q504U0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.7■□□□□ 0.58
C4orf46Q504U0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf46Q504U0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf46Q504U0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.7■□□□□ 0.58
C4orf46Q504U0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf46Q504U0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf46Q504U0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.7■□□□□ 0.58
C4orf46Q504U0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
C4orf46Q504U0 RP9P-202ENST00000450133 1212 ntBASIC18.7■□□□□ 0.58
C4orf46Q504U0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf46Q504U0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf46Q504U0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
C4orf46Q504U0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
C4orf46Q504U0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf46Q504U0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
C4orf46Q504U0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.7■□□□□ 0.58
C4orf46Q504U0 AL022069.1-201ENST00000568025 1636 ntBASIC18.7■□□□□ 0.58
C4orf46Q504U0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf46Q504U0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.7■□□□□ 0.58
C4orf46Q504U0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
C4orf46Q504U0 AC079630.1-202ENST00000618127 1840 ntBASIC18.7■□□□□ 0.58
C4orf46Q504U0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.69■□□□□ 0.58
C4orf46Q504U0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.69■□□□□ 0.58
C4orf46Q504U0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C4orf46Q504U0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C4orf46Q504U0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
C4orf46Q504U0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
C4orf46Q504U0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
C4orf46Q504U0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C4orf46Q504U0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.69■□□□□ 0.58
C4orf46Q504U0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C4orf46Q504U0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C4orf46Q504U0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.69■□□□□ 0.58
C4orf46Q504U0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf46Q504U0 AC080038.3-201ENST00000623346 1952 ntBASIC18.68■□□□□ 0.58
C4orf46Q504U0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
C4orf46Q504U0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.68■□□□□ 0.58
C4orf46Q504U0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf46Q504U0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf46Q504U0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf46Q504U0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
C4orf46Q504U0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.68■□□□□ 0.58
C4orf46Q504U0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf46Q504U0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.68■□□□□ 0.58
C4orf46Q504U0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf46Q504U0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf46Q504U0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.68■□□□□ 0.58
C4orf46Q504U0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf46Q504U0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
C4orf46Q504U0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.68■□□□□ 0.58
C4orf46Q504U0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C4orf46Q504U0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
C4orf46Q504U0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C4orf46Q504U0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.67■□□□□ 0.58
C4orf46Q504U0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C4orf46Q504U0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms