Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 C1orf229-201ENST00000623686 2258 ntBASIC20.67■□□□□ 0.9
PRICKLE4Q2TBC4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PRICKLE4Q2TBC4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.67■□□□□ 0.9
PRICKLE4Q2TBC4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRICKLE4Q2TBC4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRICKLE4Q2TBC4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRICKLE4Q2TBC4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PRICKLE4Q2TBC4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
PRICKLE4Q2TBC4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRICKLE4Q2TBC4 AC133637.1-201ENST00000624115 1537 ntBASIC20.67■□□□□ 0.9
PRICKLE4Q2TBC4 SYT6-210ENST00000641643 1587 ntBASIC20.67■□□□□ 0.9
PRICKLE4Q2TBC4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.67■□□□□ 0.9
PRICKLE4Q2TBC4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRICKLE4Q2TBC4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.66■□□□□ 0.9
PRICKLE4Q2TBC4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.66■□□□□ 0.9
PRICKLE4Q2TBC4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.66■□□□□ 0.9
PRICKLE4Q2TBC4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRICKLE4Q2TBC4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRICKLE4Q2TBC4 AC133561.1-201ENST00000568600 2415 ntBASIC20.66■□□□□ 0.9
PRICKLE4Q2TBC4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRICKLE4Q2TBC4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PRICKLE4Q2TBC4 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.66■□□□□ 0.9
PRICKLE4Q2TBC4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.66■□□□□ 0.9
PRICKLE4Q2TBC4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.66■□□□□ 0.9
PRICKLE4Q2TBC4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRICKLE4Q2TBC4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRICKLE4Q2TBC4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.66■□□□□ 0.9
PRICKLE4Q2TBC4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.66■□□□□ 0.9
PRICKLE4Q2TBC4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
PRICKLE4Q2TBC4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
PRICKLE4Q2TBC4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRICKLE4Q2TBC4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.65■□□□□ 0.9
PRICKLE4Q2TBC4 AC012676.1-201ENST00000574705 1949 ntBASIC20.65■□□□□ 0.9
PRICKLE4Q2TBC4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRICKLE4Q2TBC4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.65■□□□□ 0.9
PRICKLE4Q2TBC4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRICKLE4Q2TBC4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PRICKLE4Q2TBC4 SERBP1P1-201ENST00000396021 1160 ntBASIC20.65■□□□□ 0.9
PRICKLE4Q2TBC4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.65■□□□□ 0.9
PRICKLE4Q2TBC4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRICKLE4Q2TBC4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRICKLE4Q2TBC4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRICKLE4Q2TBC4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRICKLE4Q2TBC4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRICKLE4Q2TBC4 AL138724.1-201ENST00000606771 1088 ntBASIC20.64■□□□□ 0.89
PRICKLE4Q2TBC4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.64■□□□□ 0.89
PRICKLE4Q2TBC4 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.64■□□□□ 0.89
PRICKLE4Q2TBC4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.64■□□□□ 0.89
PRICKLE4Q2TBC4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PRICKLE4Q2TBC4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PRICKLE4Q2TBC4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
PRICKLE4Q2TBC4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
PRICKLE4Q2TBC4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.63■□□□□ 0.89
PRICKLE4Q2TBC4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PRICKLE4Q2TBC4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PRICKLE4Q2TBC4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PRICKLE4Q2TBC4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRICKLE4Q2TBC4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.63■□□□□ 0.89
PRICKLE4Q2TBC4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.63■□□□□ 0.89
PRICKLE4Q2TBC4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.63■□□□□ 0.89
PRICKLE4Q2TBC4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRICKLE4Q2TBC4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRICKLE4Q2TBC4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
PRICKLE4Q2TBC4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRICKLE4Q2TBC4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRICKLE4Q2TBC4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRICKLE4Q2TBC4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRICKLE4Q2TBC4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PRICKLE4Q2TBC4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PRICKLE4Q2TBC4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.62■□□□□ 0.89
PRICKLE4Q2TBC4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
PRICKLE4Q2TBC4 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.62■□□□□ 0.89
PRICKLE4Q2TBC4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.62■□□□□ 0.89
PRICKLE4Q2TBC4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRICKLE4Q2TBC4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRICKLE4Q2TBC4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRICKLE4Q2TBC4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRICKLE4Q2TBC4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRICKLE4Q2TBC4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRICKLE4Q2TBC4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRICKLE4Q2TBC4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRICKLE4Q2TBC4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRICKLE4Q2TBC4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRICKLE4Q2TBC4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
PRICKLE4Q2TBC4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.61■□□□□ 0.89
PRICKLE4Q2TBC4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PRICKLE4Q2TBC4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRICKLE4Q2TBC4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.61■□□□□ 0.89
PRICKLE4Q2TBC4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.61■□□□□ 0.89
PRICKLE4Q2TBC4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRICKLE4Q2TBC4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRICKLE4Q2TBC4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.6■□□□□ 0.89
PRICKLE4Q2TBC4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRICKLE4Q2TBC4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PRICKLE4Q2TBC4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRICKLE4Q2TBC4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.6■□□□□ 0.89
PRICKLE4Q2TBC4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRICKLE4Q2TBC4 AC011298.3-201ENST00000615796 283 ntBASIC20.6■□□□□ 0.89
PRICKLE4Q2TBC4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRICKLE4Q2TBC4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms