Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.96■■□□□ 1.91
RFX7Q2KHR2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.96■■□□□ 1.91
RFX7Q2KHR2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.91
RFX7Q2KHR2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
RFX7Q2KHR2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RFX7Q2KHR2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
RFX7Q2KHR2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.95■■□□□ 1.9
RFX7Q2KHR2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.95■■□□□ 1.9
RFX7Q2KHR2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RFX7Q2KHR2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RFX7Q2KHR2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.95■■□□□ 1.9
RFX7Q2KHR2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RFX7Q2KHR2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RFX7Q2KHR2 MIR5787-201ENST00000611784 55 ntBASIC26.95■■□□□ 1.9
RFX7Q2KHR2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
RFX7Q2KHR2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RFX7Q2KHR2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
RFX7Q2KHR2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
RFX7Q2KHR2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RFX7Q2KHR2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RFX7Q2KHR2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RFX7Q2KHR2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.94■■□□□ 1.9
RFX7Q2KHR2 AC097381.1-201ENST00000429019 1296 ntBASIC26.94■■□□□ 1.9
RFX7Q2KHR2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RFX7Q2KHR2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.94■■□□□ 1.9
RFX7Q2KHR2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
RFX7Q2KHR2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.93■■□□□ 1.9
RFX7Q2KHR2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.93■■□□□ 1.9
RFX7Q2KHR2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RFX7Q2KHR2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RFX7Q2KHR2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RFX7Q2KHR2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.93■■□□□ 1.9
RFX7Q2KHR2 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.93■■□□□ 1.9
RFX7Q2KHR2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.93■■□□□ 1.9
RFX7Q2KHR2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.93■■□□□ 1.9
RFX7Q2KHR2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RFX7Q2KHR2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.92■■□□□ 1.9
RFX7Q2KHR2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RFX7Q2KHR2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RFX7Q2KHR2 AC233992.3-201ENST00000607491 485 ntBASIC26.92■■□□□ 1.9
RFX7Q2KHR2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.92■■□□□ 1.9
RFX7Q2KHR2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RFX7Q2KHR2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RFX7Q2KHR2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.91■■□□□ 1.9
RFX7Q2KHR2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
RFX7Q2KHR2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
RFX7Q2KHR2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.91■■□□□ 1.9
RFX7Q2KHR2 AL499627.2-201ENST00000606283 725 ntBASIC26.91■■□□□ 1.9
RFX7Q2KHR2 pRNA.6-201ENST00000610482 90 ntBASIC26.91■■□□□ 1.9
RFX7Q2KHR2 pRNA.5-201ENST00000612139 90 ntBASIC26.91■■□□□ 1.9
RFX7Q2KHR2 pRNA.11-201ENST00000618423 90 ntBASIC26.91■■□□□ 1.9
RFX7Q2KHR2 pRNA.13-201ENST00000619112 90 ntBASIC26.91■■□□□ 1.9
RFX7Q2KHR2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RFX7Q2KHR2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
RFX7Q2KHR2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RFX7Q2KHR2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RFX7Q2KHR2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RFX7Q2KHR2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.9■■□□□ 1.9
RFX7Q2KHR2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RFX7Q2KHR2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RFX7Q2KHR2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RFX7Q2KHR2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
RFX7Q2KHR2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
RFX7Q2KHR2 AC087623.3-201ENST00000607047 1098 ntBASIC26.89■■□□□ 1.9
RFX7Q2KHR2 ANKRD20A6P-201ENST00000618763 204 ntBASIC26.89■■□□□ 1.9
RFX7Q2KHR2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
RFX7Q2KHR2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.89■■□□□ 1.9
RFX7Q2KHR2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.89■■□□□ 1.9
RFX7Q2KHR2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.89■■□□□ 1.89
RFX7Q2KHR2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
RFX7Q2KHR2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.88■■□□□ 1.89
RFX7Q2KHR2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RFX7Q2KHR2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
RFX7Q2KHR2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.88■■□□□ 1.89
RFX7Q2KHR2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
RFX7Q2KHR2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RFX7Q2KHR2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
RFX7Q2KHR2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.88■■□□□ 1.89
RFX7Q2KHR2 SLC47A1P1-202ENST00000449666 945 ntBASIC26.87■■□□□ 1.89
RFX7Q2KHR2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.87■■□□□ 1.89
RFX7Q2KHR2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RFX7Q2KHR2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RFX7Q2KHR2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RFX7Q2KHR2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RFX7Q2KHR2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.86■■□□□ 1.89
RFX7Q2KHR2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.86■■□□□ 1.89
RFX7Q2KHR2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.86■■□□□ 1.89
RFX7Q2KHR2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
RFX7Q2KHR2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
RFX7Q2KHR2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.86■■□□□ 1.89
RFX7Q2KHR2 IRS3P-201ENST00000223076 1006 ntBASIC26.85■■□□□ 1.89
RFX7Q2KHR2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
RFX7Q2KHR2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RFX7Q2KHR2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.85■■□□□ 1.89
RFX7Q2KHR2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.85■■□□□ 1.89
RFX7Q2KHR2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RFX7Q2KHR2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RFX7Q2KHR2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.84■■□□□ 1.89
RFX7Q2KHR2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RFX7Q2KHR2 AC104564.3-201ENST00000582367 638 ntBASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms