Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PDS5AQ29RF7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PDS5AQ29RF7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PDS5AQ29RF7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.79■■□□□ 1.88
PDS5AQ29RF7 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.79■■□□□ 1.88
PDS5AQ29RF7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PDS5AQ29RF7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.79■■□□□ 1.88
PDS5AQ29RF7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.79■■□□□ 1.88
PDS5AQ29RF7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.79■■□□□ 1.88
PDS5AQ29RF7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PDS5AQ29RF7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.79■■□□□ 1.88
PDS5AQ29RF7 AC092068.2-201ENST00000590491 1708 ntBASIC26.79■■□□□ 1.88
PDS5AQ29RF7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PDS5AQ29RF7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.78■■□□□ 1.88
PDS5AQ29RF7 AC004687.1-201ENST00000579003 1625 ntBASIC26.78■■□□□ 1.88
PDS5AQ29RF7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.78■■□□□ 1.88
PDS5AQ29RF7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.78■■□□□ 1.88
PDS5AQ29RF7 AC068587.7-201ENST00000641602 218 ntBASIC26.78■■□□□ 1.88
PDS5AQ29RF7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PDS5AQ29RF7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PDS5AQ29RF7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PDS5AQ29RF7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.77■■□□□ 1.88
PDS5AQ29RF7 AC123595.1-201ENST00000440769 1046 ntBASIC26.77■■□□□ 1.88
PDS5AQ29RF7 AL031602.1-201ENST00000633169 911 ntBASIC26.77■■□□□ 1.88
PDS5AQ29RF7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PDS5AQ29RF7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PDS5AQ29RF7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
PDS5AQ29RF7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PDS5AQ29RF7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
PDS5AQ29RF7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PDS5AQ29RF7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.76■■□□□ 1.87
PDS5AQ29RF7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PDS5AQ29RF7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PDS5AQ29RF7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.76■■□□□ 1.87
PDS5AQ29RF7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
PDS5AQ29RF7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PDS5AQ29RF7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PDS5AQ29RF7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
PDS5AQ29RF7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
PDS5AQ29RF7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.75■■□□□ 1.87
PDS5AQ29RF7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.75■■□□□ 1.87
PDS5AQ29RF7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PDS5AQ29RF7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
PDS5AQ29RF7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
PDS5AQ29RF7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PDS5AQ29RF7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.74■■□□□ 1.87
PDS5AQ29RF7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PDS5AQ29RF7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PDS5AQ29RF7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.74■■□□□ 1.87
PDS5AQ29RF7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PDS5AQ29RF7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
PDS5AQ29RF7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PDS5AQ29RF7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.73■■□□□ 1.87
PDS5AQ29RF7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.73■■□□□ 1.87
PDS5AQ29RF7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PDS5AQ29RF7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.73■■□□□ 1.87
PDS5AQ29RF7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.73■■□□□ 1.87
PDS5AQ29RF7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PDS5AQ29RF7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PDS5AQ29RF7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PDS5AQ29RF7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
PDS5AQ29RF7 ANOS2P-203ENST00000472227 1816 ntBASIC26.72■■□□□ 1.87
PDS5AQ29RF7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
PDS5AQ29RF7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.72■■□□□ 1.87
PDS5AQ29RF7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.72■■□□□ 1.87
PDS5AQ29RF7 AL162430.1-201ENST00000480705 870 ntBASIC26.72■■□□□ 1.87
PDS5AQ29RF7 AC104564.3-201ENST00000582367 638 ntBASIC26.72■■□□□ 1.87
PDS5AQ29RF7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
PDS5AQ29RF7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
PDS5AQ29RF7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
PDS5AQ29RF7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
PDS5AQ29RF7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.71■■□□□ 1.87
PDS5AQ29RF7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PDS5AQ29RF7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
PDS5AQ29RF7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.71■■□□□ 1.87
PDS5AQ29RF7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PDS5AQ29RF7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.71■■□□□ 1.87
PDS5AQ29RF7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PDS5AQ29RF7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PDS5AQ29RF7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PDS5AQ29RF7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
PDS5AQ29RF7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC26.7■■□□□ 1.87
PDS5AQ29RF7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
PDS5AQ29RF7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.7■■□□□ 1.87
PDS5AQ29RF7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PDS5AQ29RF7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PDS5AQ29RF7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
PDS5AQ29RF7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
PDS5AQ29RF7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
PDS5AQ29RF7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.69■■□□□ 1.86
PDS5AQ29RF7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.69■■□□□ 1.86
PDS5AQ29RF7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
PDS5AQ29RF7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.69■■□□□ 1.86
PDS5AQ29RF7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PDS5AQ29RF7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PDS5AQ29RF7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
PDS5AQ29RF7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.69■■□□□ 1.86
PDS5AQ29RF7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
PDS5AQ29RF7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.69■■□□□ 1.86
PDS5AQ29RF7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms