Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 UPS2YLR168C 693 nt4.59□□□□□ -1.67
VPS38Q05919 RDN5-6RDN5-6 121 nt4.59□□□□□ -1.67
VPS38Q05919 YMR306C-AYMR306C-A 390 nt4.59□□□□□ -1.67
VPS38Q05919 TRM13YOL125W 1431 nt4.59□□□□□ -1.67
VPS38Q05919 SSH1YBR283C 1473 nt4.59□□□□□ -1.67
VPS38Q05919 YDL094CYDL094C 510 nt4.58□□□□□ -1.68
VPS38Q05919 DAS2YDR020C 699 nt4.58□□□□□ -1.68
VPS38Q05919 CIR1YGR207C 786 nt4.58□□□□□ -1.68
VPS38Q05919 YSA1YBR111C 696 nt4.58□□□□□ -1.68
VPS38Q05919 POL12YBL035C 2118 nt4.58□□□□□ -1.68
VPS38Q05919 TPA1YER049W 1935 nt4.58□□□□□ -1.68
VPS38Q05919 NNK1YKL171W 2787 nt4.58□□□□□ -1.68
VPS38Q05919 BRE4YDL231C 3378 nt4.57□□□□□ -1.68
VPS38Q05919 FLO8YER109C 2400 nt4.57□□□□□ -1.68
VPS38Q05919 TDA11YHR159W 1515 nt4.57□□□□□ -1.68
VPS38Q05919 ORC6YHR118C 1308 nt4.57□□□□□ -1.68
VPS38Q05919 YDL026WYDL026W 312 nt4.57□□□□□ -1.68
VPS38Q05919 COQ4YDR204W 1008 nt4.57□□□□□ -1.68
VPS38Q05919 SPR6YER115C 576 nt4.57□□□□□ -1.68
VPS38Q05919 TTI2YJR136C 1266 nt4.57□□□□□ -1.68
VPS38Q05919 HRT3YLR097C 1035 nt4.57□□□□□ -1.68
VPS38Q05919 TDA5YLR426W 981 nt4.57□□□□□ -1.68
VPS38Q05919 TOM7YNL070W 183 nt4.57□□□□□ -1.68
VPS38Q05919 YNR061CYNR061C 660 nt4.57□□□□□ -1.68
VPS38Q05919 GPI2YPL076W 843 nt4.57□□□□□ -1.68
VPS38Q05919 ICY2YPL250C 411 nt4.57□□□□□ -1.68
VPS38Q05919 TRE1YPL176C 2352 nt4.57□□□□□ -1.68
VPS38Q05919 PHO84YML123C 1764 nt4.57□□□□□ -1.68
VPS38Q05919 STB2YMR053C 2553 nt4.57□□□□□ -1.68
VPS38Q05919 snR63snR63 255 nt4.56□□□□□ -1.68
VPS38Q05919 YGL193CYGL193C 312 nt4.56□□□□□ -1.68
VPS38Q05919 PNP1YLR209C 936 nt4.56□□□□□ -1.68
VPS38Q05919 NMD4YLR363C 657 nt4.56□□□□□ -1.68
VPS38Q05919 YMR105W-AYMR105W-A 195 nt4.56□□□□□ -1.68
VPS38Q05919 SPS4YOR313C 1017 nt4.56□□□□□ -1.68
VPS38Q05919 CBP3YPL215W 1008 nt4.56□□□□□ -1.68
VPS38Q05919 YPK9YOR291W 4419 nt4.56□□□□□ -1.68
VPS38Q05919 GCR1YPL075W 2358 nt4.56□□□□□ -1.68
VPS38Q05919 YCF1YDR135C 4548 nt4.55□□□□□ -1.68
VPS38Q05919 NPL4YBR170C 1743 nt4.55□□□□□ -1.68
VPS38Q05919 TYR1YBR166C 1359 nt4.55□□□□□ -1.68
VPS38Q05919 HUL4YJR036C 2679 nt4.55□□□□□ -1.68
VPS38Q05919 RIM21YNL294C 1602 nt4.55□□□□□ -1.68
VPS38Q05919 SBE2YDR351W 2595 nt4.55□□□□□ -1.68
VPS38Q05919 PTC1YDL006W 846 nt4.55□□□□□ -1.68
VPS38Q05919 RPL14AYKL006W 417 nt4.55□□□□□ -1.68
VPS38Q05919 FMP46YKR049C 402 nt4.55□□□□□ -1.68
VPS38Q05919 RGS2YOR107W 930 nt4.55□□□□□ -1.68
VPS38Q05919 NGL3YML118W 1518 nt4.55□□□□□ -1.68
VPS38Q05919 PMT4YJR143C 2289 nt4.55□□□□□ -1.68
VPS38Q05919 ECM32YER176W 3366 nt4.54□□□□□ -1.68
VPS38Q05919 PHM7YOL084W 2976 nt4.54□□□□□ -1.68
VPS38Q05919 ARC1YGL105W 1131 nt4.54□□□□□ -1.68
VPS38Q05919 MRP13YGR084C 1020 nt4.54□□□□□ -1.68
VPS38Q05919 JLP1YLL057C 1239 nt4.54□□□□□ -1.68
VPS38Q05919 URE2YNL229C 1065 nt4.54□□□□□ -1.68
VPS38Q05919 RCL1YOL010W 1104 nt4.54□□□□□ -1.68
VPS38Q05919 LAS21YJL062W 2493 nt4.54□□□□□ -1.68
VPS38Q05919 SEN1YLR430W 6696 nt4.54□□□□□ -1.68
VPS38Q05919 SSH4YKL124W 1740 nt4.54□□□□□ -1.68
VPS38Q05919 MIS1YBR084W 2928 nt4.54□□□□□ -1.68
VPS38Q05919 GAS4YOL132W 1416 nt4.54□□□□□ -1.68
VPS38Q05919 YND1YER005W 1893 nt4.54□□□□□ -1.68
VPS38Q05919 YMR1YJR110W 2067 nt4.53□□□□□ -1.68
VPS38Q05919 SUL2YLR092W 2682 nt4.53□□□□□ -1.68
VPS38Q05919 THI7YLR237W 1797 nt4.53□□□□□ -1.68
VPS38Q05919 HMS1YOR032C 1305 nt4.53□□□□□ -1.68
VPS38Q05919 TYW1YPL207W 2433 nt4.53□□□□□ -1.68
VPS38Q05919 SKM1YOL113W 1968 nt4.53□□□□□ -1.68
VPS38Q05919 YGR219WYGR219W 342 nt4.53□□□□□ -1.68
VPS38Q05919 VMA22YHR060W 546 nt4.53□□□□□ -1.68
VPS38Q05919 BMT5YIL096C 1011 nt4.53□□□□□ -1.68
VPS38Q05919 CYC1YJR048W 330 nt4.53□□□□□ -1.68
VPS38Q05919 ECM15YBL001C 315 nt4.53□□□□□ -1.68
VPS38Q05919 HEK2YBL032W 1146 nt4.53□□□□□ -1.68
VPS38Q05919 TIF34YMR146C 1044 nt4.53□□□□□ -1.68
VPS38Q05919 RRP40YOL142W 723 nt4.53□□□□□ -1.68
VPS38Q05919 YBR016WYBR016W 387 nt4.53□□□□□ -1.68
VPS38Q05919 YPL077CYPL077C 723 nt4.53□□□□□ -1.68
VPS38Q05919 PWR1PWR1 941 nt4.53□□□□□ -1.68
VPS38Q05919 SOF1YLL011W 1470 nt4.53□□□□□ -1.68
VPS38Q05919 CDC48YDL126C 2508 nt4.53□□□□□ -1.68
VPS38Q05919 MMT1YMR177W 1533 nt4.52□□□□□ -1.69
VPS38Q05919 RRP45YDR280W 918 nt4.52□□□□□ -1.69
VPS38Q05919 YMR084WYMR084W 789 nt4.52□□□□□ -1.69
VPS38Q05919 ENT1YDL161W 1365 nt4.52□□□□□ -1.69
VPS38Q05919 GPB1YOR371C 2694 nt4.51□□□□□ -1.69
VPS38Q05919 YGR266WYGR266W 2106 nt4.51□□□□□ -1.69
VPS38Q05919 YEH2YLR020C 1617 nt4.51□□□□□ -1.69
VPS38Q05919 ALG11YNL048W 1647 nt4.51□□□□□ -1.69
VPS38Q05919 SSA2YLL024C 1920 nt4.51□□□□□ -1.69
VPS38Q05919 YCR050CYCR050C 309 nt4.51□□□□□ -1.69
VPS38Q05919 BIO2YGR286C 1128 nt4.51□□□□□ -1.69
VPS38Q05919 CCS1YMR038C 750 nt4.51□□□□□ -1.69
VPS38Q05919 SIW14YNL032W 846 nt4.51□□□□□ -1.69
VPS38Q05919 YNL296WYNL296W 315 nt4.51□□□□□ -1.69
VPS38Q05919 IRC14YOR135C 342 nt4.51□□□□□ -1.69
VPS38Q05919 SHE3YBR130C 1278 nt4.51□□□□□ -1.69
VPS38Q05919 EFM2YBR271W 1260 nt4.51□□□□□ -1.69
VPS38Q05919 TFA1YKL028W 1449 nt4.51□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms