Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
H3F3AP84243 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.82■□□□□ 0.76
H3F3AP84243 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.82■□□□□ 0.76
H3F3AP84243 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.81■□□□□ 0.76
H3F3AP84243 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
H3F3AP84243 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
H3F3AP84243 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.81■□□□□ 0.76
H3F3AP84243 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
H3F3AP84243 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.81■□□□□ 0.76
H3F3AP84243 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.81■□□□□ 0.76
H3F3AP84243 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.81■□□□□ 0.76
H3F3AP84243 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
H3F3AP84243 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
H3F3AP84243 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
H3F3AP84243 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.81■□□□□ 0.76
H3F3AP84243 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
H3F3AP84243 AC133637.1-201ENST00000624115 1537 ntBASIC19.81■□□□□ 0.76
H3F3AP84243 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.81■□□□□ 0.76
H3F3AP84243 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
H3F3AP84243 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
H3F3AP84243 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
H3F3AP84243 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
H3F3AP84243 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
H3F3AP84243 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
H3F3AP84243 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
H3F3AP84243 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H3F3AP84243 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
H3F3AP84243 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H3F3AP84243 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
H3F3AP84243 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.8■□□□□ 0.76
H3F3AP84243 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.8■□□□□ 0.76
H3F3AP84243 AC011298.3-201ENST00000615796 283 ntBASIC19.8■□□□□ 0.76
H3F3AP84243 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H3F3AP84243 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.8■□□□□ 0.76
H3F3AP84243 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H3F3AP84243 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H3F3AP84243 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
H3F3AP84243 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
H3F3AP84243 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
H3F3AP84243 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.79■□□□□ 0.76
H3F3AP84243 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H3F3AP84243 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H3F3AP84243 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
H3F3AP84243 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H3F3AP84243 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
H3F3AP84243 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H3F3AP84243 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
H3F3AP84243 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H3F3AP84243 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H3F3AP84243 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H3F3AP84243 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H3F3AP84243 C9orf163-202ENST00000624034 2573 ntBASIC19.79■□□□□ 0.76
H3F3AP84243 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
H3F3AP84243 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.78■□□□□ 0.76
H3F3AP84243 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.78■□□□□ 0.76
H3F3AP84243 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
H3F3AP84243 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
H3F3AP84243 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.78■□□□□ 0.76
H3F3AP84243 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H3F3AP84243 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H3F3AP84243 UNC93B3-201ENST00000308076 687 ntBASIC19.78■□□□□ 0.76
H3F3AP84243 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H3F3AP84243 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.78■□□□□ 0.76
H3F3AP84243 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
H3F3AP84243 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H3F3AP84243 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H3F3AP84243 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
H3F3AP84243 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.78■□□□□ 0.76
H3F3AP84243 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
H3F3AP84243 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
H3F3AP84243 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
H3F3AP84243 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
H3F3AP84243 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
H3F3AP84243 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
H3F3AP84243 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
H3F3AP84243 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.77■□□□□ 0.76
H3F3AP84243 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.77■□□□□ 0.76
H3F3AP84243 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
H3F3AP84243 AC136469.2-201ENST00000623944 1028 ntBASIC19.77■□□□□ 0.76
H3F3AP84243 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.77■□□□□ 0.76
H3F3AP84243 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.77■□□□□ 0.76
H3F3AP84243 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H3F3AP84243 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.76■□□□□ 0.75
H3F3AP84243 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
H3F3AP84243 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.76■□□□□ 0.75
H3F3AP84243 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H3F3AP84243 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H3F3AP84243 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
H3F3AP84243 AC096631.2-201ENST00000436136 790 ntBASIC19.76■□□□□ 0.75
H3F3AP84243 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
H3F3AP84243 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.76■□□□□ 0.75
H3F3AP84243 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
H3F3AP84243 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.76■□□□□ 0.75
H3F3AP84243 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
H3F3AP84243 AC004687.1-201ENST00000579003 1625 ntBASIC19.76■□□□□ 0.75
H3F3AP84243 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.76■□□□□ 0.75
H3F3AP84243 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
H3F3AP84243 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.75■□□□□ 0.75
H3F3AP84243 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
H3F3AP84243 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms