Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.15■□□□□ 0.98
GABREP78334 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GABREP78334 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
GABREP78334 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
GABREP78334 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GABREP78334 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GABREP78334 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GABREP78334 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.15■□□□□ 0.98
GABREP78334 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.15■□□□□ 0.98
GABREP78334 KRT18P61-201ENST00000585825 1298 ntBASIC21.15■□□□□ 0.98
GABREP78334 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.15■□□□□ 0.98
GABREP78334 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.15■□□□□ 0.98
GABREP78334 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.15■□□□□ 0.98
GABREP78334 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
GABREP78334 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
GABREP78334 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
GABREP78334 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
GABREP78334 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
GABREP78334 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
GABREP78334 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
GABREP78334 CDCA4P2-201ENST00000441182 718 ntBASIC21.14■□□□□ 0.97
GABREP78334 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.14■□□□□ 0.97
GABREP78334 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GABREP78334 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
GABREP78334 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GABREP78334 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GABREP78334 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GABREP78334 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
GABREP78334 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
GABREP78334 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.13■□□□□ 0.97
GABREP78334 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GABREP78334 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GABREP78334 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.13■□□□□ 0.97
GABREP78334 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.13■□□□□ 0.97
GABREP78334 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.13■□□□□ 0.97
GABREP78334 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
GABREP78334 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.13■□□□□ 0.97
GABREP78334 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.13■□□□□ 0.97
GABREP78334 RAP2CP1-201ENST00000605103 478 ntBASIC21.13■□□□□ 0.97
GABREP78334 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GABREP78334 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
GABREP78334 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
GABREP78334 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.12■□□□□ 0.97
GABREP78334 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.12■□□□□ 0.97
GABREP78334 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.12■□□□□ 0.97
GABREP78334 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GABREP78334 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
GABREP78334 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.11■□□□□ 0.97
GABREP78334 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.11■□□□□ 0.97
GABREP78334 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GABREP78334 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.11■□□□□ 0.97
GABREP78334 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.11■□□□□ 0.97
GABREP78334 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
GABREP78334 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
GABREP78334 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.11■□□□□ 0.97
GABREP78334 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.11■□□□□ 0.97
GABREP78334 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.11■□□□□ 0.97
GABREP78334 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.11■□□□□ 0.97
GABREP78334 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
GABREP78334 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GABREP78334 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
GABREP78334 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GABREP78334 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GABREP78334 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GABREP78334 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GABREP78334 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GABREP78334 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
GABREP78334 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GABREP78334 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.1■□□□□ 0.97
GABREP78334 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.1■□□□□ 0.97
GABREP78334 AC026185.1-201ENST00000445748 174 ntBASIC21.1■□□□□ 0.97
GABREP78334 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.1■□□□□ 0.97
GABREP78334 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.1■□□□□ 0.97
GABREP78334 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.1■□□□□ 0.97
GABREP78334 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.1■□□□□ 0.97
GABREP78334 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.1■□□□□ 0.97
GABREP78334 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GABREP78334 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
GABREP78334 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.09■□□□□ 0.97
GABREP78334 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
GABREP78334 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GABREP78334 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GABREP78334 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GABREP78334 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GABREP78334 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.09■□□□□ 0.97
GABREP78334 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.09■□□□□ 0.97
GABREP78334 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.09■□□□□ 0.97
GABREP78334 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.09■□□□□ 0.97
GABREP78334 BID-214ENST00000617586 542 ntTSL 5 BASIC21.09■□□□□ 0.97
GABREP78334 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
GABREP78334 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GABREP78334 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.08■□□□□ 0.97
GABREP78334 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GABREP78334 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
GABREP78334 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GABREP78334 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.08■□□□□ 0.97
GABREP78334 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
GABREP78334 AC006970.2-201ENST00000450065 779 ntBASIC21.08■□□□□ 0.97
GABREP78334 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.08■□□□□ 0.97
GABREP78334 TPRG1LP1-201ENST00000598702 760 ntBASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms