Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TRA2BP62995 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRA2BP62995 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.93■□□□□ 0.94
TRA2BP62995 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.93■□□□□ 0.94
TRA2BP62995 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.93■□□□□ 0.94
TRA2BP62995 AL512631.2-201ENST00000604634 923 ntBASIC20.93■□□□□ 0.94
TRA2BP62995 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TRA2BP62995 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.93■□□□□ 0.94
TRA2BP62995 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRA2BP62995 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.93■□□□□ 0.94
TRA2BP62995 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRA2BP62995 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRA2BP62995 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TRA2BP62995 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRA2BP62995 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRA2BP62995 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TRA2BP62995 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TRA2BP62995 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TRA2BP62995 AL117328.2-201ENST00000624617 1940 ntBASIC20.92■□□□□ 0.94
TRA2BP62995 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TRA2BP62995 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.92■□□□□ 0.94
TRA2BP62995 AC092171.4-201ENST00000609130 632 ntBASIC20.92■□□□□ 0.94
TRA2BP62995 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.92■□□□□ 0.94
TRA2BP62995 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.92■□□□□ 0.94
TRA2BP62995 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.92■□□□□ 0.94
TRA2BP62995 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TRA2BP62995 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRA2BP62995 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.92■□□□□ 0.94
TRA2BP62995 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.91■□□□□ 0.94
TRA2BP62995 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRA2BP62995 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRA2BP62995 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRA2BP62995 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRA2BP62995 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRA2BP62995 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.91■□□□□ 0.94
TRA2BP62995 SRD5A1P1-201ENST00000442297 786 ntBASIC20.91■□□□□ 0.94
TRA2BP62995 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.91■□□□□ 0.94
TRA2BP62995 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRA2BP62995 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.91■□□□□ 0.94
TRA2BP62995 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.91■□□□□ 0.94
TRA2BP62995 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRA2BP62995 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRA2BP62995 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRA2BP62995 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRA2BP62995 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TRA2BP62995 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRA2BP62995 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRA2BP62995 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRA2BP62995 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRA2BP62995 AC004687.1-201ENST00000579003 1625 ntBASIC20.9■□□□□ 0.94
TRA2BP62995 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.9■□□□□ 0.94
TRA2BP62995 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRA2BP62995 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRA2BP62995 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.9■□□□□ 0.94
TRA2BP62995 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TRA2BP62995 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.9■□□□□ 0.94
TRA2BP62995 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRA2BP62995 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.89■□□□□ 0.94
TRA2BP62995 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRA2BP62995 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.89■□□□□ 0.93
TRA2BP62995 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRA2BP62995 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRA2BP62995 AC099791.2-201ENST00000605725 427 ntBASIC20.89■□□□□ 0.93
TRA2BP62995 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.89■□□□□ 0.93
TRA2BP62995 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TRA2BP62995 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
TRA2BP62995 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.89■□□□□ 0.93
TRA2BP62995 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRA2BP62995 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.88■□□□□ 0.93
TRA2BP62995 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRA2BP62995 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRA2BP62995 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRA2BP62995 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRA2BP62995 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRA2BP62995 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRA2BP62995 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.88■□□□□ 0.93
TRA2BP62995 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
TRA2BP62995 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
TRA2BP62995 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRA2BP62995 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.87■□□□□ 0.93
TRA2BP62995 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRA2BP62995 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRA2BP62995 AC087742.1-201ENST00000575880 1738 ntBASIC20.87■□□□□ 0.93
TRA2BP62995 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.87■□□□□ 0.93
TRA2BP62995 GUSBP5-202ENST00000510805 1989 ntBASIC20.87■□□□□ 0.93
TRA2BP62995 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRA2BP62995 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRA2BP62995 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.87■□□□□ 0.93
TRA2BP62995 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.87■□□□□ 0.93
TRA2BP62995 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRA2BP62995 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRA2BP62995 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRA2BP62995 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRA2BP62995 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRA2BP62995 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRA2BP62995 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRA2BP62995 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.86■□□□□ 0.93
TRA2BP62995 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRA2BP62995 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.86■□□□□ 0.93
TRA2BP62995 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms