Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CLDN2P57739 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN2P57739 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CLDN2P57739 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN2P57739 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.95■■□□□ 1.1
CLDN2P57739 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.95■■□□□ 1.1
CLDN2P57739 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.95■■□□□ 1.1
CLDN2P57739 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN2P57739 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN2P57739 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.95■■□□□ 1.1
CLDN2P57739 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.95■■□□□ 1.1
CLDN2P57739 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN2P57739 AC012414.1-201ENST00000556676 535 ntBASIC21.95■■□□□ 1.1
CLDN2P57739 AL358852.1-201ENST00000623174 1268 ntBASIC21.95■■□□□ 1.1
CLDN2P57739 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN2P57739 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN2P57739 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN2P57739 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN2P57739 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CLDN2P57739 AL353803.4-201ENST00000565882 1934 ntBASIC21.94■■□□□ 1.1
CLDN2P57739 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN2P57739 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN2P57739 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN2P57739 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.94■■□□□ 1.1
CLDN2P57739 AC004687.1-201ENST00000579003 1625 ntBASIC21.94■■□□□ 1.1
CLDN2P57739 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN2P57739 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN2P57739 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN2P57739 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN2P57739 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN2P57739 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN2P57739 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CLDN2P57739 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.93■■□□□ 1.1
CLDN2P57739 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN2P57739 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN2P57739 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.93■■□□□ 1.1
CLDN2P57739 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CLDN2P57739 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CLDN2P57739 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN2P57739 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CLDN2P57739 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN2P57739 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.92■■□□□ 1.1
CLDN2P57739 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN2P57739 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN2P57739 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.92■■□□□ 1.1
CLDN2P57739 AC034268.1-201ENST00000441047 882 ntBASIC21.92■■□□□ 1.1
CLDN2P57739 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.92■■□□□ 1.1
CLDN2P57739 AP005435.1-201ENST00000529293 1178 ntBASIC21.92■■□□□ 1.1
CLDN2P57739 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.92■■□□□ 1.1
CLDN2P57739 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.92■■□□□ 1.1
CLDN2P57739 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.92■■□□□ 1.1
CLDN2P57739 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN2P57739 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN2P57739 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CLDN2P57739 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN2P57739 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CLDN2P57739 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN2P57739 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CLDN2P57739 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN2P57739 AC027612.3-201ENST00000413684 1047 ntBASIC21.91■■□□□ 1.1
CLDN2P57739 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.91■■□□□ 1.1
CLDN2P57739 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.91■■□□□ 1.1
CLDN2P57739 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.91■■□□□ 1.1
CLDN2P57739 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CLDN2P57739 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN2P57739 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN2P57739 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN2P57739 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN2P57739 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN2P57739 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN2P57739 AL354811.1-201ENST00000610286 706 ntBASIC21.9■■□□□ 1.1
CLDN2P57739 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN2P57739 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN2P57739 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLDN2P57739 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLDN2P57739 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLDN2P57739 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
CLDN2P57739 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CLDN2P57739 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN2P57739 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CLDN2P57739 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.89■■□□□ 1.09
CLDN2P57739 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.89■■□□□ 1.09
CLDN2P57739 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.89■■□□□ 1.09
CLDN2P57739 DUX4L2-201ENST00000561772 1275 ntBASIC21.89■■□□□ 1.09
CLDN2P57739 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.89■■□□□ 1.09
CLDN2P57739 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.89■■□□□ 1.09
CLDN2P57739 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.89■■□□□ 1.09
CLDN2P57739 DUX4L6-201ENST00000626483 1275 ntBASIC21.89■■□□□ 1.09
CLDN2P57739 DUX4L1-201ENST00000627662 1275 ntBASIC21.89■■□□□ 1.09
CLDN2P57739 DUX4L8-201ENST00000629013 1275 ntBASIC21.89■■□□□ 1.09
CLDN2P57739 DUX4L3-201ENST00000630187 1275 ntBASIC21.89■■□□□ 1.09
CLDN2P57739 DUX4L7-201ENST00000630678 1275 ntBASIC21.89■■□□□ 1.09
CLDN2P57739 DUX4L5-201ENST00000630834 1275 ntBASIC21.89■■□□□ 1.09
CLDN2P57739 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN2P57739 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN2P57739 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN2P57739 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN2P57739 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.88■■□□□ 1.09
CLDN2P57739 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN2P57739 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms