Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC27.15■■□□□ 1.94
PDE1AP54750 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PDE1AP54750 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC27.15■■□□□ 1.94
PDE1AP54750 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PDE1AP54750 AL499627.2-201ENST00000606283 725 ntBASIC27.15■■□□□ 1.94
PDE1AP54750 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PDE1AP54750 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC27.15■■□□□ 1.94
PDE1AP54750 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC27.15■■□□□ 1.94
PDE1AP54750 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PDE1AP54750 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC27.15■■□□□ 1.94
PDE1AP54750 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PDE1AP54750 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PDE1AP54750 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
PDE1AP54750 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC27.14■■□□□ 1.94
PDE1AP54750 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PDE1AP54750 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
PDE1AP54750 AC006455.2-201ENST00000429931 906 ntBASIC27.14■■□□□ 1.94
PDE1AP54750 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.14■■□□□ 1.94
PDE1AP54750 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.14■■□□□ 1.94
PDE1AP54750 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PDE1AP54750 AC241377.3-202ENST00000626088 1088 ntBASIC27.14■■□□□ 1.94
PDE1AP54750 AC241585.3-202ENST00000628937 1088 ntBASIC27.14■■□□□ 1.94
PDE1AP54750 AC245100.8-202ENST00000629247 1058 ntBASIC27.14■■□□□ 1.94
PDE1AP54750 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PDE1AP54750 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC27.14■■□□□ 1.93
PDE1AP54750 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC27.14■■□□□ 1.93
PDE1AP54750 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.13■■□□□ 1.93
PDE1AP54750 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PDE1AP54750 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PDE1AP54750 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PDE1AP54750 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
PDE1AP54750 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PDE1AP54750 AC099791.2-201ENST00000605725 427 ntBASIC27.13■■□□□ 1.93
PDE1AP54750 MIR4466-201ENST00000606121 54 ntBASIC27.13■■□□□ 1.93
PDE1AP54750 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
PDE1AP54750 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC27.13■■□□□ 1.93
PDE1AP54750 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
PDE1AP54750 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
PDE1AP54750 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
PDE1AP54750 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PDE1AP54750 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
PDE1AP54750 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC27.12■■□□□ 1.93
PDE1AP54750 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC27.12■■□□□ 1.93
PDE1AP54750 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PDE1AP54750 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.12■■□□□ 1.93
PDE1AP54750 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.12■■□□□ 1.93
PDE1AP54750 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC27.12■■□□□ 1.93
PDE1AP54750 AC087742.1-201ENST00000575880 1738 ntBASIC27.12■■□□□ 1.93
PDE1AP54750 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PDE1AP54750 AC004687.1-201ENST00000579003 1625 ntBASIC27.12■■□□□ 1.93
PDE1AP54750 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PDE1AP54750 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PDE1AP54750 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PDE1AP54750 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC27.11■■□□□ 1.93
PDE1AP54750 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PDE1AP54750 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
PDE1AP54750 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PDE1AP54750 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PDE1AP54750 AL117328.2-201ENST00000624617 1940 ntBASIC27.1■■□□□ 1.93
PDE1AP54750 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PDE1AP54750 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC27.1■■□□□ 1.93
PDE1AP54750 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
PDE1AP54750 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
PDE1AP54750 ESRRAP2-201ENST00000418437 1549 ntBASIC27.1■■□□□ 1.93
PDE1AP54750 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PDE1AP54750 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PDE1AP54750 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PDE1AP54750 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PDE1AP54750 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PDE1AP54750 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PDE1AP54750 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PDE1AP54750 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC27.09■■□□□ 1.93
PDE1AP54750 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PDE1AP54750 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
PDE1AP54750 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
PDE1AP54750 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
PDE1AP54750 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27.09■■□□□ 1.93
PDE1AP54750 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC27.09■■□□□ 1.93
PDE1AP54750 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PDE1AP54750 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC27.09■■□□□ 1.93
PDE1AP54750 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC27.09■■□□□ 1.93
PDE1AP54750 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PDE1AP54750 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PDE1AP54750 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
PDE1AP54750 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PDE1AP54750 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
PDE1AP54750 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
PDE1AP54750 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC27.08■■□□□ 1.93
PDE1AP54750 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PDE1AP54750 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PDE1AP54750 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PDE1AP54750 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PDE1AP54750 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.08■■□□□ 1.93
PDE1AP54750 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
PDE1AP54750 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PDE1AP54750 AC131281.2-201ENST00000520478 145 ntBASIC27.08■■□□□ 1.93
PDE1AP54750 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
PDE1AP54750 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC27.07■■□□□ 1.92
PDE1AP54750 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PDE1AP54750 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms